DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and egg-6

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_492348.1 Gene:egg-6 / 172670 WormBaseID:WBGene00010621 Length:961 Species:Caenorhabditis elegans


Alignment Length:948 Identity:206/948 - (21%)
Similarity:353/948 - (37%) Gaps:255/948 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRLRTLV-LLHFIALASSEYVYGEPEFKCPKKSKALYPCECVKGSDNGLYIRCENTNLATLSVAL 67
            :|..||: :.|.||..||      .|..||:..:   .|:| |.|.:.:.:.|...::.|::   
 Worm     1 MRWLTLIAVAHLIAFLSS------AEITCPRIPE---KCDC-KISKSMIILSCNGEDVKTIA--- 52

  Fly    68 QNLASFGMPIEELTIYRGHFVRLYGPLFAHIKARMLIIEETPLATIEDYVFYGVNNTLEQLHLLR 132
            |.:.:  ..|:||.|..|..|::....|..:  |.:.|..:.|.:.....:..|..|:|.:.:..
 Worm    53 QTVGT--SQIDELHILNGTDVKIESLPFNGL--RTIAILNSTLQSFSPTAWRHVEATIEHITING 113

  Fly   133 TNLSHVGLLGFGILGKAKELVIDGHAFQQLPKDLFAGQEIANSLGIIRVTNGNLSDLPIETFQPL 197
            ..|..|.:  ||.|.....:.::.:....:|...|.|   .::|..:|:.|..:.|.|.::...:
 Worm   114 NELKTVPV--FGNLSTLMSMNLNSNQISSIPDKAFNG---LSALTQLRLENNAICDFPPKSLDAV 173

  Fly   198 R-KLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSEL 261
            : .|..||:.||.|:.:.....:|...|..||:..|.|.::....:.:|..|....|.:|.|..:
 Worm   174 KASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRI 238

  Fly   262 SRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLA 326
            ....|.....|:.|:|..|.|:.||.|..:|.:.|..|.:|:|.|..:  .:...:..:..:.:.
 Worm   239 HPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALYAL--PSLKDLPNLKQVRVD 301

  Fly   327 RNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIINVSHNALELIETAAFENCVNI 391
            .|.:.|||...|:....::|:.:..|||.:|.:||                       ||:...:
 Worm   302 GNLITKIETLAFSNNPNLQLISVQNNNIVQISRNS-----------------------FESLDKL 343

  Fly   392 TVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNC 456
            .||.:.:|.||...|..||             .:.||.|:.|:|           |::|.:..:.
 Worm   344 VVLLVGNNSLAKIERGMFD-------------GMKNLQQLSIRN-----------NTLTALDASS 384

  Fly   457 FPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPT--LLE-----M 514
            |.:|..|.|:|:.||.|..|..|.|..|..|..:|||:|.:...|:|.|....:  ||:     .
 Worm   385 FAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKISGFKTSVFKKKISNILLDGNQLIC 449

  Fly   515 DLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKL--FQLPI-------------------SLNEL 558
            |.|.||.::               ||..|::...  ||..|                   ..||.
 Worm   450 DESFNEFLT---------------YLIANKVRTFLPFQQEIMCHGPEKYAGVRLKDLMMKKANET 499

  Fly   559 YFSHNRLTNIPSGT--------------------------WPVMNSLIYL--------------- 582
            ....:||..:|.|:                          .|::|:|...               
 Worm   500 LSEGSRLLGVPQGSNQHSLLSSFLPSLGPLGTLNGAGGAAIPLVNTLTNTIPALRSIPGFGGNIP 564

  Fly   583 ------DLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTL 641
                  .:.:..|.|.:.|  |||.||    :....|  ||      |.|.::.|.....|: .:
 Worm   565 VGTGASSVPNKNLNDAIEG--FTGPLV----RFATGG--QP------VASDIEQLIRSIPNM-VV 614

  Fly   642 ERSAFGKL------PVLFELNLYGNQVKDISKRAFEGLLQ--------LLTLNLSSNGIQTLQND 692
            ....||.:      |.:.:..|.|.|:..|.|...:.:::        ....||:.|.::..:  
 Worm   615 NVPGFGDIDLSKMDPTMIQYVLNGGQIPGIDKATLDKIVKQTMNKMHTAAAANLAGNPVEGQE-- 677

  Fly   693 IFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETL-DLSHNRISFVTKKTFPSHQY-----I 751
                           ..|..||...:|::..::|.|.| .|:.|:...:.:  :.:||.     |
 Worm   678 ---------------KVLPPLDKLPSGLVTQVMSGEPLPGLNENQTKIIME--YYTHQMPGMDGI 725

  Fly   752 P---------------YN------LRNLNLSYNLMPILTYDITFGTKKLVRLDVSHNQINDLR-- 793
            |               :|      |:.|...|||..|         ...|...|:..::.|:|  
 Worm   726 PARPVESQGNTTANNMFNPAMFDLLKMLPPGYNLSKI---------PMEVIAAVTRGEVPDMRLL 781

  Fly   794 -RGVISNF----TSLQSLDMSYNELSNLKSEEHIFDLP 826
             ..::.:|    |||.|: .:.....|:..||.:..||
 Worm   782 PEDLLEHFKQHTTSLTSM-FAGATAKNISIEEILEKLP 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380 6/22 (27%)
leucine-rich repeat 150..175 CDD:275380 3/24 (13%)
leucine-rich repeat 176..199 CDD:275380 5/23 (22%)
LRR_8 198..258 CDD:290566 16/60 (27%)
leucine-rich repeat 200..223 CDD:275380 7/22 (32%)
LRR_RI 201..545 CDD:238064 89/350 (25%)
leucine-rich repeat 224..271 CDD:275380 11/46 (24%)
LRR_8 245..306 CDD:290566 19/60 (32%)
leucine-rich repeat 272..295 CDD:275380 9/22 (41%)
LRR_8 296..354 CDD:290566 12/57 (21%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
LRR_8 322..401 CDD:290566 17/78 (22%)
leucine-rich repeat 322..343 CDD:275380 5/20 (25%)
leucine-rich repeat 344..367 CDD:275380 7/22 (32%)
leucine-rich repeat 371..390 CDD:275380 2/18 (11%)
leucine-rich repeat 391..414 CDD:275380 8/22 (36%)
leucine-rich repeat 416..438 CDD:275380 5/21 (24%)
LRR_8 437..495 CDD:290566 18/57 (32%)
leucine-rich repeat 439..462 CDD:275380 4/22 (18%)
leucine-rich repeat 463..486 CDD:275380 10/22 (45%)
LRR_RI 486..738 CDD:238064 64/341 (19%)
LRR_8 486..545 CDD:290566 17/65 (26%)
leucine-rich repeat 487..510 CDD:275380 8/22 (36%)
leucine-rich repeat 511..534 CDD:275380 6/27 (22%)
leucine-rich repeat 535..554 CDD:275380 6/39 (15%)
LRR_8 554..614 CDD:290566 17/106 (16%)
leucine-rich repeat 555..578 CDD:275380 7/48 (15%)
leucine-rich repeat 579..603 CDD:275380 7/44 (16%)
leucine-rich repeat 604..627 CDD:275380 4/22 (18%)
LRR_8 626..710 CDD:290566 14/97 (14%)
leucine-rich repeat 628..649 CDD:275380 4/20 (20%)
leucine-rich repeat 652..672 CDD:275380 5/19 (26%)
LRR_8 698..765 CDD:290566 18/93 (19%)
leucine-rich repeat 700..726 CDD:275380 4/25 (16%)
leucine-rich repeat 727..745 CDD:275380 4/18 (22%)
LRR_8 777..839 CDD:290566 14/57 (25%)
leucine-rich repeat 779..802 CDD:275380 5/29 (17%)
leucine-rich repeat 829..852 CDD:275380
egg-6NP_492348.1 LRR_8 107..162 CDD:290566 12/59 (20%)
leucine-rich repeat 107..127 CDD:275380 6/21 (29%)
leucine-rich repeat 128..151 CDD:275380 3/25 (12%)
LRR_RI <144..281 CDD:238064 37/139 (27%)
leucine-rich repeat 152..200 CDD:275380 12/47 (26%)
LRR_8 176..233 CDD:290566 15/56 (27%)
leucine-rich repeat 201..224 CDD:275380 6/22 (27%)
LRR_8 225..283 CDD:290566 18/57 (32%)
leucine-rich repeat 225..248 CDD:275380 5/22 (23%)
LRR_RI <240..458 CDD:238064 70/266 (26%)
leucine-rich repeat 249..272 CDD:275380 9/22 (41%)
LRR_8 271..329 CDD:290566 12/59 (20%)
leucine-rich repeat 273..294 CDD:275380 5/22 (23%)
leucine-rich repeat 295..318 CDD:275380 5/22 (23%)
LRR_8 317..375 CDD:290566 22/104 (21%)
leucine-rich repeat 319..342 CDD:275380 9/45 (20%)
leucine-rich repeat 343..366 CDD:275380 8/35 (23%)
LRR_8 365..425 CDD:290566 24/70 (34%)
leucine-rich repeat 367..390 CDD:275380 8/33 (24%)
leucine-rich repeat 391..414 CDD:275380 10/22 (45%)
leucine-rich repeat 415..434 CDD:275380 7/18 (39%)
leucine-rich repeat 437..449 CDD:275378 2/11 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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