DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and LOC100495962

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_004912402.2 Gene:LOC100495962 / 100495962 XenbaseID:XB-GENE-29082895 Length:1055 Species:Xenopus tropicalis


Alignment Length:1004 Identity:254/1004 - (25%)
Similarity:382/1004 - (38%) Gaps:291/1004 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 EIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIK 235
            |:..|..:|...|.       |:|.....|..:||:.|.....:         |:..||....: 
 Frog    81 ELLLSQNLILTINN-------ESFHSWHNLTKIDLNWNHYPKSR---------LDNADICKRGL- 128

  Fly   236 KLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLF 300
            ::|....:.||||....:.||.|.::.:|.   .|.|..|.||:|.|..:.......:..|:.||
 Frog   129 EIENGTFSYLTKLEKLFIDHNYLCKIPQGI---PSTLTFLSLSYNNIFSVKKQILSPLINLKNLF 190

  Fly   301 LSDNV--------LTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKI 357
            ||:|.        :.||..|||..:..:                  |:      |.|:.||:|.:
 Frog   191 LSNNCYFGNECGQVLDIEEGTFSGLTEL------------------TE------LSLSFNNLTHV 231

  Fly   358 EKN---SFKDIYQAIINVSHNALELIETAAFENCVNITVLDLSHN--RL--ANFSRRSFDETTFA 415
            ...   |.|.:|     :|:|.:::|....|.|.||:.||.||.|  |.  ||:..::....|..
 Frog   232 PSKLPASLKQLY-----LSNNNIQIINRNDFHNLVNLEVLYLSGNCPRCFNANYPCKNLCPNTSI 291

  Fly   416 TYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGV 480
            |....::.||.||.::.:.: |.||.:..::                                  
 Frog   292 TIDHFAFQNLKNLTELHLSS-TSLKTIPPTW---------------------------------- 321

  Fly   481 FQTLFSLRSIDLSHNSM-REIKSSTF-GTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNN 543
            ||....|:.:.|..|.: .||.|:.| ..||.|..:|||.|             ..||. |.||.
 Frog   322 FQNTTQLKKLYLERNYLVNEIASADFLLNLPFLEVLDLSFN-------------YDLRS-YTNNI 372

  Fly   544 QLEKLFQLPISLNELY-----FSHNRLTNIPSGTWPVMN--SLIYLDLSHNQLG--DTLNGESFT 599
            .:...|...:||.||:     |.|....|:.    |::|  .|..|:|..|.:.  |....:.||
 Frog   373 NISDHFSKLVSLKELHIQGYVFKHIAANNLA----PLLNLSKLKILNLGTNFIRQVDFKIFQQFT 433

  Fly   600 GLLVV--------------QRLKL-----------QNNGISQPPKDAVAVMSTLQYLHLENNNIT 639
            ||.::              .::||           .:.|:|.|.:....:..|.       :.:.
 Frog   434 GLELIYLSENRITPFSEKNNKMKLVEGYEDKHSRVSSPGVSFPTQFNFQMTKTF-------SEVV 491

  Fly   640 TLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGI-QTLQNDIFVGLPSLRNL 703
            ..:.|:.||     .|:|..|.:..|..:.|.....:..|||||||| |.|....|:.|.:|..|
 Frog   492 KPQCSSRGK-----TLDLSLNSIFFIDPKEFRSFSDVSCLNLSSNGIGQDLNGTEFIYLKNLTYL 551

  Fly   704 DLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIP--YNLRNLNLSYNLMP 766
            |||||   |||..:.....:|.|||.||||:|...|:......|.::|.  .:|:.||||:|.:.
 Frog   552 DLSFN---KLDFDSINAFQELPSLEVLDLSYNSHYFIVDGVIHSLKFIENLQHLKVLNLSWNKIS 613

  Fly   767 ILTYDITFGTKKLVRLDVSHNQINDLRRG-------VISNFTSLQSLDMSYNELSNLKSEEHIFD 824
            .|| |....:..|..|..|.|:::.|.:.       :..|.:||..||:|||.||.:|.|.....
 Frog   614 TLT-DFRLTSHSLKELQFSGNRLDVLWKNEDKRYHKLFMNLSSLTCLDISYNRLSKIKGELRYLP 677

  Fly   825 LP----------------------QNLSWLDLSHNK------------------------IYHLP 843
            |.                      :||.:|||||||                        |..||
 Frog   678 LSLTELYLNSNELVYFGWEELQAYENLKYLDLSHNKLTMIMGNLSIHTYSLSSLIISYNSISSLP 742

  Fly   844 FANLVKVKSLKYVDLTNNSLEDVPASIV--GSMRNGSQVL-LAGNPLHCGCNARPLKYFMLQQTI 905
            .|.|.|.::|..:||:.|.|:.:.:|::  || .|..:|| |.|||..|.|...           
 Frog   743 VAFLHKARNLSELDLSFNHLKSINSSVLLSGS-ENYLKVLGLKGNPFVCTCEIT----------- 795

  Fly   906 AGEDLKSIYCGT---PALIKDKQLISLDDEYLHCAEDEQEMYKGIDYEQLTDVRFREVKTNKAGM 967
              :.:..||...   |.|..|          ::||..|.:...||.|   .||...::.    |.
 Frog   796 --DFISWIYANNVTIPRLATD----------VNCATPENKKGSGIIY---FDVHTCDLD----GA 841

  Fly   968 LTLCWYVSGF--SDVSDFHVYIRSSSNDVLHQSDYAYNNRTAQIPVEELSTLGEEKLRGAEIC-- 1028
            ..:.::.|.|  ..::...:.|...|.|:.    |.|:             |...|||..::|  
 Frog   842 AMILYFFSVFLVMSITVLPILINVFSWDLW----YVYH-------------LCVAKLRLHKVCKS 889

  Fly  1029 -------IVSRDSDGNTRKW-FSGQCQQL 1049
                   |...:.|.|...| |:..||.|
 Frog   890 ECLYDVFITYDNKDPNVNDWIFNELCQHL 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380 1/3 (33%)
leucine-rich repeat 176..199 CDD:275380 4/22 (18%)
PPP1R42 191..359 CDD:455733 42/175 (24%)
LRR_8 198..258 CDD:404697 14/59 (24%)
leucine-rich repeat 200..223 CDD:275380 4/22 (18%)
leucine-rich repeat 224..271 CDD:275380 12/46 (26%)
leucine-rich repeat 272..295 CDD:275380 6/22 (27%)
leucine-rich repeat 296..319 CDD:275380 11/30 (37%)
leucine-rich repeat 322..343 CDD:275380 1/20 (5%)
leucine-rich repeat 344..367 CDD:275380 7/25 (28%)
LRR 346..718 CDD:443914 108/415 (26%)
leucine-rich repeat 371..390 CDD:275380 5/18 (28%)
leucine-rich repeat 391..414 CDD:275380 8/26 (31%)
leucine-rich repeat 416..438 CDD:275380 5/21 (24%)
leucine-rich repeat 439..462 CDD:275380 2/22 (9%)
leucine-rich repeat 463..486 CDD:275380 2/22 (9%)
leucine-rich repeat 487..510 CDD:275380 8/24 (33%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..554 CDD:275380 6/18 (33%)
leucine-rich repeat 555..578 CDD:275380 8/29 (28%)
leucine-rich repeat 579..603 CDD:275380 9/25 (36%)
leucine-rich repeat 604..627 CDD:275380 5/47 (11%)
leucine-rich repeat 628..649 CDD:275380 2/20 (10%)
PPP1R42 631..849 CDD:455733 83/273 (30%)
leucine-rich repeat 652..672 CDD:275380 5/19 (26%)
leucine-rich repeat 700..726 CDD:275380 11/25 (44%)
leucine-rich repeat 727..745 CDD:275380 8/17 (47%)
leucine-rich repeat 779..802 CDD:275380 6/29 (21%)
leucine-rich repeat 829..852 CDD:275380 14/46 (30%)
LOC100495962XP_004912402.2 LRR 76..453 CDD:443914 113/473 (24%)
leucine-rich repeat 81..102 CDD:275380 6/27 (22%)
leucine-rich repeat 103..140 CDD:275380 9/46 (20%)
leucine-rich repeat 141..160 CDD:275380 5/21 (24%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
leucine-rich repeat 186..217 CDD:275380 11/30 (37%)
leucine-rich repeat 218..262 CDD:275380 14/72 (19%)
leucine-rich repeat 263..303 CDD:275380 12/39 (31%)
leucine-rich repeat 304..327 CDD:275380 6/57 (11%)
leucine-rich repeat 328..353 CDD:275380 8/24 (33%)
leucine-rich repeat 354..383 CDD:275380 11/42 (26%)
leucine-rich repeat 384..410 CDD:275380 8/29 (28%)
leucine-rich repeat 411..434 CDD:275380 6/22 (27%)
LRR 500..824 CDD:443914 107/356 (30%)
leucine-rich repeat 500..522 CDD:275380 6/26 (23%)
leucine-rich repeat 526..547 CDD:275380 12/20 (60%)
leucine-rich repeat 548..571 CDD:275380 11/25 (44%)
leucine-rich repeat 572..601 CDD:275380 10/28 (36%)
leucine-rich repeat 602..624 CDD:275380 9/22 (41%)
leucine-rich repeat 625..655 CDD:275380 6/29 (21%)
leucine-rich repeat 656..679 CDD:275380 10/22 (45%)
leucine-rich repeat 680..703 CDD:275380 0/22 (0%)
leucine-rich repeat 704..727 CDD:275380 8/22 (36%)
leucine-rich repeat 728..751 CDD:275380 6/22 (27%)
leucine-rich repeat 752..770 CDD:275380 6/17 (35%)
SEFIR 893..1030 CDD:474043 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.

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