DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and rxfp1

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_031751332.1 Gene:rxfp1 / 100494807 XenbaseID:XB-GENE-985695 Length:760 Species:Xenopus tropicalis


Alignment Length:635 Identity:137/635 - (21%)
Similarity:231/635 - (36%) Gaps:133/635 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NLASFGMPIEELTIYRGHF----VRLYGPLFAHIKARMLIIEETPLATIEDYVFYGVNNTLEQL- 128
            ||||.....::::...|:|    :....|.|.|...    ::|......||..  |.||...|. 
 Frog    16 NLASTSSESQDISCPLGYFPCGNITKCLPQFMHCNG----VDECGNQADEDNC--GDNNGWSQQL 74

  Fly   129 -HLLRTNLSHVGLLGFGI----------------LGKAKELVIDGHAFQQLPKDLFAGQEIANSL 176
             .|...:...:||..|.:                |.:..||..||...:.:|       .::.::
 Frog    75 DKLFEKHYEKIGLNVFDLEMKPSECTLGPVPTQCLCRGLELDCDGAKLRTVP-------SVSPNV 132

  Fly   177 GIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQH 241
            .|:.:.|..|..|..:.|:....|:.|.|..|.:..:..:.||.|..|..|.:|||:|..|:...
 Frog   133 TIMSLQNNMLRKLGPDEFRIFPDLRKLYLQHNNIRTVSVHAFKGLYNLTKLYLSHNEITTLKPGV 197

  Fly   242 IADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARL-DANSFRGMRFLRRLFLSDNV 305
            ..||.:|.|..:.:|.::.:...||...:.|.:|.:.:|.:.|| |.:..:.|..|..|....|.
 Frog   198 FEDLHRLEWLIIENNKITRIYPQTFQGLNSLILLVMMNNFLERLPDKSLCQHMPKLNWLDFEGNN 262

  Fly   306 LTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQ-AI 369
            :..:...||.|.|.:..:.:.|||:..|....|:.:..::.||||.|.|.....:..|.:.: :.
 Frog   263 VQSLTNTTFISCATLTVLVMRRNRISTISENTFSSLYRLDELDLANNRIEAFSPSLMKGVKELSQ 327

  Fly   370 INVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQ 434
            :|:|||.::.|:...|:..:.:..|.|....:.|..||.|                     :|::
 Frog   328 LNISHNPIQKIQADQFDYVIKLKSLSLEGIEIPNIQRRMF---------------------MPLK 371

  Fly   435 NMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSL------------ 487
            |:|.:......|.......:||.|....:.:::   |.::||...||..:.|:            
 Frog   372 NLTHIYFKKFQYCGFAPHVRNCKPNTDGISSLE---NLLASIVQRVFVWVVSVITCFGNIFVICT 433

  Fly   488 RSIDLSHNSMREIKSSTFGTLPTLLE------------------------MDLSHNELVSVVRGS 528
            |....|.|.:..:...:......|:.                        ||.:...||    ||
 Frog   434 RPYIRSENKLHAMSIMSLCCADCLMGVYLFVIGYFDLKYRGEYNENAQAWMDSTQCRLV----GS 494

  Fly   529 LAKL-TSLRQLYLNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLS-----HN 587
            ||.| |.:..|.|....|||...:......|.....|........|.:...:.::.||     ||
 Frog   495 LAILSTEVSVLLLTYLTLEKYICIVYPFRCLKPGKCRTITTLILIWIIGFVIAFIPLSNQTFFHN 559

  Fly   588 QLGDTLNGESFTGLLVVQRLKLQNNGI------SQPPKDAVAVMSTLQYL 631
            ..|                    .||:      .||...|..:.|.:.:|
 Frog   560 YYG--------------------TNGVCFPLHSEQPESTAAQIYSVIIFL 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380 6/40 (15%)
leucine-rich repeat 150..175 CDD:275380 5/24 (21%)
leucine-rich repeat 176..199 CDD:275380 5/22 (23%)
PPP1R42 191..359 CDD:455733 47/168 (28%)
LRR_8 198..258 CDD:404697 19/59 (32%)
leucine-rich repeat 200..223 CDD:275380 7/22 (32%)
leucine-rich repeat 224..271 CDD:275380 14/46 (30%)
leucine-rich repeat 272..295 CDD:275380 7/23 (30%)
leucine-rich repeat 296..319 CDD:275380 6/22 (27%)
leucine-rich repeat 322..343 CDD:275380 5/20 (25%)
leucine-rich repeat 344..367 CDD:275380 7/22 (32%)
LRR 346..718 CDD:443914 66/335 (20%)
leucine-rich repeat 371..390 CDD:275380 6/18 (33%)
leucine-rich repeat 391..414 CDD:275380 6/22 (27%)
leucine-rich repeat 416..438 CDD:275380 2/21 (10%)
leucine-rich repeat 439..462 CDD:275380 4/22 (18%)
leucine-rich repeat 463..486 CDD:275380 5/22 (23%)
leucine-rich repeat 487..510 CDD:275380 3/34 (9%)
leucine-rich repeat 511..534 CDD:275380 10/47 (21%)
leucine-rich repeat 535..554 CDD:275380 5/18 (28%)
leucine-rich repeat 555..578 CDD:275380 3/22 (14%)
leucine-rich repeat 579..603 CDD:275380 5/28 (18%)
leucine-rich repeat 604..627 CDD:275380 5/28 (18%)
leucine-rich repeat 628..649 CDD:275380 1/4 (25%)
PPP1R42 631..849 CDD:455733 1/1 (100%)
leucine-rich repeat 652..672 CDD:275380
leucine-rich repeat 700..726 CDD:275380
leucine-rich repeat 727..745 CDD:275380
leucine-rich repeat 779..802 CDD:275380
leucine-rich repeat 829..852 CDD:275380
rxfp1XP_031751332.1 LDLa 29..64 CDD:238060 8/38 (21%)
LRRNT 105..134 CDD:214470 6/35 (17%)
LRR 131..>363 CDD:443914 61/231 (26%)
leucine-rich repeat 132..155 CDD:275380 5/22 (23%)
leucine-rich repeat 156..179 CDD:275380 7/22 (32%)
leucine-rich repeat 180..203 CDD:275380 9/22 (41%)
leucine-rich repeat 204..227 CDD:275380 5/22 (23%)
leucine-rich repeat 228..252 CDD:275380 7/23 (30%)
leucine-rich repeat 253..276 CDD:275380 6/22 (27%)
leucine-rich repeat 277..300 CDD:275380 5/22 (23%)
leucine-rich repeat 301..324 CDD:275380 7/22 (32%)
leucine-rich repeat 325..348 CDD:275380 6/22 (27%)
leucine-rich repeat 349..370 CDD:275380 6/41 (15%)
7tmA_RXFP1_LGR7 410..696 CDD:320631 38/204 (19%)
TM helix 1 411..437 CDD:320631 4/25 (16%)
TM helix 2 444..469 CDD:320631 1/24 (4%)
TM helix 3 489..519 CDD:320631 13/33 (39%)
TM helix 4 530..552 CDD:320631 2/21 (10%)
TM helix 5 580..609 CDD:320631 2/10 (20%)
TM helix 6 625..655 CDD:320631
TM helix 7 664..689 CDD:320631
Blue background indicates that the domain is not in the aligned region.

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