DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment conv and igfals

DIOPT Version :9

Sequence 1:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_002940278.2 Gene:igfals / 100489984 XenbaseID:XB-GENE-1008441 Length:601 Species:Xenopus tropicalis


Alignment Length:769 Identity:180/769 - (23%)
Similarity:297/769 - (38%) Gaps:242/769 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 NLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLG 249
            ||:.:|   ..|....::|.|.||.|..::...|:||..|:.|::..:|:..||.|.:..|..| 
 Frog    57 NLTRVP---EPPPPAARSLWLDGNNLTTVQAGAFRNLSHLDFLNLQSSQVASLEQQALHGLKAL- 117

  Fly   250 WCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTF 314
                :|                   |||..|.|..|..::|...:.|..|.|::|.||.|..|.|
 Frog   118 ----AH-------------------LHLERNMIKSLAPSTFTHTQNLVSLTLNNNFLTKIEDGLF 159

  Fly   315 GSIARIGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNSFKDIYQAIINVSHNALEL 379
            ..::.:.                                               .:|:..|.|.:
 Frog   160 SGLSNLW-----------------------------------------------YLNLGWNLLVV 177

  Fly   380 IETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNA 444
            :....|.:.:|:..|.|:.|||              .|.|.|.          ..::..||.|:.
 Frog   178 LPDMVFHDLLNLRELVLAGNRL--------------VYLQPSL----------FLSLGELKELDL 218

  Fly   445 SYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLP 509
            |.||:..|..|.|.:..:.|.:.::||:||::....|..:.:||.:|||||.:..:...||..||
 Frog   219 SGNSLKGIKANVFTRQQKTHKLYLNHNHISTVAPRAFSGMKNLRWLDLSHNRLTALYEDTFFGLP 283

  Fly   510 TLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQLPISLNELYFSHNRLTNIPSGTWP 574
            :|..:.||:|           .|||||               |....:|.|              
 Frog   284 SLNVLRLSNN-----------SLTSLR---------------PRIFKDLQF-------------- 308

  Fly   575 VMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNIT 639
                |:.|:|..|::...|. .:|.||                        :.|:.|.|.:||:.
 Frog   309 ----LVELNLGQNKIKILLE-RTFEGL------------------------AQLELLSLNHNNVQ 344

  Fly   640 TLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLD 704
            .:...:|..|..:..:||.||.:|.:::..|:||.:|.:|::.|:.:..::..:|.||.|:|.|.
 Frog   345 EIRPGSFLGLLNVAVINLSGNCLKSLAEHCFKGLGKLHSLHMESSCLSHIKPQMFAGLSSIRRLF 409

  Fly   705 LSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILT 769
            |..|.:..:::.:   ..||..|..|||..|:::.:|.::|...:         ||||.|:    
 Frog   410 LQNNEIVAIEDHS---FTDLHGLLELDLRSNKLTHLTTRSFTGLK---------NLSYLLL---- 458

  Fly   770 YDITFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDL 834
                           |.|||                          |.....:|...|.|.||||
 Frog   459 ---------------SSNQI--------------------------LTISPEVFSPVQQLQWLDL 482

  Fly   835 SHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGNPLHCGCNARPLKYF 899
            |.|::..|.....:.:.||:|:.|.||.|:.:..:.:.......|:.|.||...|||..:.|:..
 Frog   483 SDNQLKALTEDIFLPLSSLRYLSLKNNCLKTISVNFLIPPPTMQQLWLNGNQWDCGCALKGLRDL 547

  Fly   900 MLQ---------QTIA-GEDLKS-----IYCGTP--ALIKDKQLISLDDEYLHC 936
            .|:         |:|: |:|..|     |.|.:|  |:.:|.:.:| :..:.||
 Frog   548 ALRNSTIVPHLVQSISEGDDTASPVYNNITCASPPEAMGQDIRDLS-EGHFAHC 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380 4/13 (31%)
LRR_8 198..258 CDD:290566 17/59 (29%)
leucine-rich repeat 200..223 CDD:275380 8/22 (36%)
LRR_RI 201..545 CDD:238064 81/343 (24%)
leucine-rich repeat 224..271 CDD:275380 9/46 (20%)
LRR_8 245..306 CDD:290566 14/60 (23%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
LRR_8 296..354 CDD:290566 9/57 (16%)
leucine-rich repeat 296..319 CDD:275380 9/22 (41%)
LRR_8 322..401 CDD:290566 8/78 (10%)
leucine-rich repeat 322..343 CDD:275380 0/20 (0%)
leucine-rich repeat 344..367 CDD:275380 0/22 (0%)
leucine-rich repeat 371..390 CDD:275380 4/18 (22%)
leucine-rich repeat 391..414 CDD:275380 5/22 (23%)
leucine-rich repeat 416..438 CDD:275380 3/21 (14%)
LRR_8 437..495 CDD:290566 20/57 (35%)
leucine-rich repeat 439..462 CDD:275380 9/22 (41%)
leucine-rich repeat 463..486 CDD:275380 6/22 (27%)
LRR_RI 486..738 CDD:238064 64/251 (25%)
LRR_8 486..545 CDD:290566 20/58 (34%)
leucine-rich repeat 487..510 CDD:275380 10/22 (45%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..554 CDD:275380 3/18 (17%)
LRR_8 554..614 CDD:290566 10/59 (17%)
leucine-rich repeat 555..578 CDD:275380 2/22 (9%)
leucine-rich repeat 579..603 CDD:275380 8/23 (35%)
leucine-rich repeat 604..627 CDD:275380 0/22 (0%)
LRR_8 626..710 CDD:290566 26/83 (31%)
leucine-rich repeat 628..649 CDD:275380 6/20 (30%)
leucine-rich repeat 652..672 CDD:275380 6/19 (32%)
LRR_8 698..765 CDD:290566 18/66 (27%)
leucine-rich repeat 700..726 CDD:275380 6/25 (24%)
leucine-rich repeat 727..745 CDD:275380 6/17 (35%)
LRR_8 777..839 CDD:290566 14/61 (23%)
leucine-rich repeat 779..802 CDD:275380 4/22 (18%)
leucine-rich repeat 829..852 CDD:275380 8/22 (36%)
igfalsXP_002940278.2 leucine-rich repeat 69..92 CDD:275380 8/22 (36%)
PLN00113 71..>534 CDD:215061 157/683 (23%)
leucine-rich repeat 93..116 CDD:275380 7/22 (32%)
leucine-rich repeat 117..140 CDD:275380 9/46 (20%)
leucine-rich repeat 141..164 CDD:275380 9/22 (41%)
leucine-rich repeat 165..188 CDD:275380 4/69 (6%)
leucine-rich repeat 189..212 CDD:275380 8/46 (17%)
leucine-rich repeat 213..236 CDD:275380 9/22 (41%)
leucine-rich repeat 237..260 CDD:275380 6/22 (27%)
leucine-rich repeat 261..284 CDD:275380 10/22 (45%)
leucine-rich repeat 285..308 CDD:275380 11/48 (23%)
leucine-rich repeat 309..332 CDD:275380 8/47 (17%)
leucine-rich repeat 333..354 CDD:275380 6/20 (30%)
leucine-rich repeat 357..380 CDD:275380 8/22 (36%)
leucine-rich repeat 381..404 CDD:275380 6/22 (27%)
leucine-rich repeat 405..428 CDD:275380 6/25 (24%)
leucine-rich repeat 429..450 CDD:275380 7/20 (35%)
leucine-rich repeat 453..472 CDD:275380 9/63 (14%)
leucine-rich repeat 477..500 CDD:275380 8/22 (36%)
leucine-rich repeat 525..537 CDD:275378 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm14081
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4879
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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