DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and tlrs5

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:XP_002937550.2 Gene:tlrs5 / 100489423 XenbaseID:XB-GENE-22201327 Length:653 Species:Xenopus tropicalis


Alignment Length:632 Identity:178/632 - (28%)
Similarity:277/632 - (43%) Gaps:150/632 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 AFQQLPK-------DLFAGQEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKR 215
            :|.::|.       ||...|.:.  || .:||.|..| :....|:....|.||||.||::.||..
 Frog    63 SFNRIPSISQDSFPDLLHLQTLL--LG-SQVTPGTFS-VGKSAFRGFPNLITLDLGGNRIINLHP 123

  Fly   216 NQFKNLRELEVLDISHNQIKK--LEAQHIADLTKLGWCNVSHNALSELSRG-TFARNSVLKVLHL 277
            ..|:.|..||||.:.||.:.:  ||:....|||.|...::|.|.:..:... ||.:.|.:..|.|
 Frog   124 EAFEGLSWLEVLLLDHNGLDESVLESGMFKDLTSLKKLDLSFNNIRRVRPDPTFLKLSSISFLLL 188

  Fly   278 SHNQIARL---DANSFRGMRFLRRLFLSDNVL----TDIGRGTFGSIARIGTID---------LA 326
            ..|:::.|   |..:.:|.| |:.|.:|.|.|    |......|.:|. :||:|         :.
 Frog   189 KFNKVSMLCGEDLQNLQGRR-LQLLDMSSNPLQLSSTPHCTNPFNNIT-LGTLDVSSMGWNAEMV 251

  Fly   327 RNRLKKIEFQMFTQMNYVELLDLAE-------NNITKIEKNSFKDIYQAIINVSHNALELIETAA 384
            .|.::.|.   .||::|:::...|.       :|:....|::|..:                   
 Frog   252 ENFVRTIS---GTQVDYIKMRHTAGLGSGFGFHNLKDPNKDTFSGL------------------- 294

  Fly   385 FENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSI 449
              |..|:.:||||:..:::...:.|                                        
 Frog   295 --NSSNVQILDLSNGFISHLVPQLF---------------------------------------- 317

  Fly   450 TEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTL--PTLL 512
                 :.||||..|   |:|.|.|:.:.:|.|..|..|.|::||.|.:.|:..|:|..|  .:|.
 Frog   318 -----SAFPKLLSL---DLSSNQINRMSSGAFSGLGELVSLNLSGNLLGELMGSSFQGLGATSLK 374

  Fly   513 EMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQLPISLNELYF---SHNRLTNI------ 568
            .:|||.|.:.:|..|:|...|:|..|.|.:|.|.|:  .|..|..:.|   ..||:::|      
 Frog   375 TLDLSSNHIGAVQYGALDSFTALTSLNLRDNALNKI--PPTKLQGVTFVLLKQNRISDIYNIISF 437

  Fly   569 -PSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLK---LQNNGI---SQPPKDAVAVMS 626
             |..|        .||||.|:|.|.   .|...:|.:|.||   |.:|.:   |.|....:...|
 Frog   438 CPHAT--------ILDLSSNRLTDF---RSLWQILELQSLKYLSLASNSLYRCSLPHTSNITRTS 491

  Fly   627 TLQYLHLENNNITTLERSA-----FGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGI 686
            .|.||.|.:|.:..:.:|.     |..|..|..|||..||:.:|....|..|..|.||:||.||.
 Frog   492 GLVYLDLSDNALGPVLKSGECGDIFMHLGSLKSLNLARNQLSNIPDTMFRSLSSLQTLDLSGNGF 556

  Fly   687 QTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLS 733
            :.:|:::|.||.:|:.|:|..::|..|   ::.|||.|.|||::|||
 Frog   557 KEIQSNLFTGLTALKTLNLGKSNLVTL---SSSVLDPLGSLESIDLS 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380 5/23 (22%)
leucine-rich repeat 176..199 CDD:275380 7/22 (32%)
PPP1R42 191..359 CDD:455733 54/193 (28%)
LRR_8 198..258 CDD:404697 25/61 (41%)
leucine-rich repeat 200..223 CDD:275380 11/22 (50%)
leucine-rich repeat 224..271 CDD:275380 16/49 (33%)
leucine-rich repeat 272..295 CDD:275380 6/25 (24%)
leucine-rich repeat 296..319 CDD:275380 8/26 (31%)
leucine-rich repeat 322..343 CDD:275380 6/29 (21%)
leucine-rich repeat 344..367 CDD:275380 4/29 (14%)
LRR 346..718 CDD:443914 105/401 (26%)
leucine-rich repeat 371..390 CDD:275380 1/18 (6%)
leucine-rich repeat 391..414 CDD:275380 5/22 (23%)
leucine-rich repeat 416..438 CDD:275380 0/21 (0%)
leucine-rich repeat 439..462 CDD:275380 4/22 (18%)
leucine-rich repeat 463..486 CDD:275380 8/22 (36%)
leucine-rich repeat 487..510 CDD:275380 9/24 (38%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
leucine-rich repeat 535..554 CDD:275380 7/18 (39%)
leucine-rich repeat 555..578 CDD:275380 7/32 (22%)
leucine-rich repeat 579..603 CDD:275380 8/23 (35%)
leucine-rich repeat 604..627 CDD:275380 7/28 (25%)
leucine-rich repeat 628..649 CDD:275380 7/25 (28%)
PPP1R42 631..849 CDD:455733 41/108 (38%)
leucine-rich repeat 652..672 CDD:275380 8/19 (42%)
leucine-rich repeat 700..726 CDD:275380 9/25 (36%)
leucine-rich repeat 727..745 CDD:275380 5/7 (71%)
leucine-rich repeat 779..802 CDD:275380
leucine-rich repeat 829..852 CDD:275380
tlrs5XP_002937550.2 RNA1 <100..269 CDD:444072 52/173 (30%)
LRR_8 106..168 CDD:404697 25/61 (41%)
leucine-rich repeat 108..131 CDD:275380 11/22 (50%)
leucine-rich repeat 132..157 CDD:275380 10/24 (42%)
leucine-rich repeat 158..182 CDD:275380 5/23 (22%)
leucine-rich repeat 183..208 CDD:275380 6/24 (25%)
leucine-rich repeat 209..232 CDD:275380 6/22 (27%)
LRR 291..632 CDD:443914 112/395 (28%)
leucine-rich repeat 299..322 CDD:275380 6/67 (9%)
leucine-rich repeat 323..346 CDD:275380 9/25 (36%)
leucine-rich repeat 347..372 CDD:275380 9/24 (38%)
leucine-rich repeat 373..396 CDD:275380 8/22 (36%)
leucine-rich repeat 397..440 CDD:275380 12/44 (27%)
leucine-rich repeat 418..431 CDD:275378 3/12 (25%)
leucine-rich repeat 441..492 CDD:275380 17/61 (28%)
leucine-rich repeat 493..521 CDD:275380 8/27 (30%)
leucine-rich repeat 522..545 CDD:275380 9/22 (41%)
leucine-rich repeat 546..569 CDD:275380 11/22 (50%)
leucine-rich repeat 570..591 CDD:275380 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.

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