DRSC/TRiP Functional Genomics Resources

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Protein Alignment conv and LRRC70

DIOPT Version :10

Sequence 1:NP_610948.2 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster
Sequence 2:NP_852607.3 Gene:LRRC70 / 100130733 HGNCID:35155 Length:622 Species:Homo sapiens


Alignment Length:482 Identity:125/482 - (25%)
Similarity:224/482 - (46%) Gaps:70/482 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 QNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMR 498
            |..|| :.:|.....::.|||| ||:              |::|            :.|:.|::.
Human    37 QLCTG-RQINCRNLGLSSIPKN-FPE--------------STVF------------LYLTGNNIS 73

  Fly   499 EIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKL----FQLPISLNELY 559
            .|..|....|.:|:.:.|.::.::.|...:..:|..|..|:||||.:::|    |:..::|..||
Human    74 YINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLY 138

  Fly   560 FSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAV 624
            ..:|:::.:|.|.:..:.|:.||:|..|:| ..|...:|.|::.::.|.|.||.|.:..:.....
Human   139 LQYNQVSFVPRGVFNDLVSVQYLNLQRNRL-TVLGSGTFVGMVALRILDLSNNNILRISESGFQH 202

  Fly   625 MSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTL 689
            :..|..|:|.:||:|.:..:||..|..|..|:|..|.::.|...||:||..|..|.|.::.|:.:
Human   203 LENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNV 267

  Fly   690 QNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYN 754
            ..|.|.|:.:|::|.||.|.|..|::.|..:|.:|:.|:   |..|||..:...||   :.:..:
Human   268 TRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLK---LDRNRIISIDNDTF---ENMGAS 326

  Fly   755 LRNLNLSYNLMPILTYDITFGTKKLVRLDVSHN------QINDLRRGVIS----------NFTSL 803
            |:.||||:|.:..|...:......|:.|..:.|      ::..||..:.|          |..|:
Human   327 LKILNLSFNNLTALHPRVLKPLSSLIHLQANSNPWECNCKLLGLRDWLASSAITLNIYCQNPPSM 391

  Fly   804 QSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIYHLPFANLV---KVKS----LKYVDLTNN 861
            :...:.|..::|..:.    .:..:.:|..:....|:|...|.::   ||.:    |:..:..|.
Human   392 RGRALRYINITNCVTS----SINVSRAWAVVKSPHIHHKTTALMMAWHKVTTNGSPLENTETENI 452

  Fly   862 SL-EDVPASIVGSMRNGSQVLLAGNPL 887
            :. |.:|.|..|..   .|....||||
Human   453 TFWERIPTSPAGRF---FQENAFGNPL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
convNP_610948.2 leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 150..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
PPP1R42 191..359 CDD:455733
LRR_8 198..258 CDD:404697
leucine-rich repeat 200..223 CDD:275380
leucine-rich repeat 224..271 CDD:275380
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
leucine-rich repeat 322..343 CDD:275380
leucine-rich repeat 344..367 CDD:275380
LRR 346..718 CDD:443914 81/287 (28%)
leucine-rich repeat 371..390 CDD:275380
leucine-rich repeat 391..414 CDD:275380
leucine-rich repeat 416..438 CDD:275380 1/3 (33%)
leucine-rich repeat 439..462 CDD:275380 7/22 (32%)
leucine-rich repeat 463..486 CDD:275380 2/22 (9%)
leucine-rich repeat 487..510 CDD:275380 5/22 (23%)
leucine-rich repeat 511..534 CDD:275380 4/22 (18%)
leucine-rich repeat 535..554 CDD:275380 8/22 (36%)
leucine-rich repeat 555..578 CDD:275380 6/22 (27%)
leucine-rich repeat 579..603 CDD:275380 8/23 (35%)
leucine-rich repeat 604..627 CDD:275380 5/22 (23%)
leucine-rich repeat 628..649 CDD:275380 8/20 (40%)
PPP1R42 631..849 CDD:455733 62/236 (26%)
leucine-rich repeat 652..672 CDD:275380 7/19 (37%)
leucine-rich repeat 700..726 CDD:275380 10/25 (40%)
leucine-rich repeat 727..745 CDD:275380 5/17 (29%)
leucine-rich repeat 779..802 CDD:275380 7/38 (18%)
leucine-rich repeat 829..852 CDD:275380 6/25 (24%)
LRRC70NP_852607.3 LRRNT 31..59 CDD:396168 8/23 (35%)
LRR 49..>383 CDD:443914 100/367 (27%)
LRR 1 61..82 6/32 (19%)
leucine-rich repeat 65..85 CDD:275380 5/19 (26%)
LRR 2 85..106 3/20 (15%)
leucine-rich repeat 86..109 CDD:275380 4/22 (18%)
LRR 3 109..130 8/20 (40%)
leucine-rich repeat 110..133 CDD:275380 8/22 (36%)
LRR 4 133..154 6/20 (30%)
leucine-rich repeat 134..157 CDD:275380 6/22 (27%)
LRR 5 157..178 8/21 (38%)
leucine-rich repeat 158..181 CDD:275380 8/23 (35%)
LRR 6 181..202 5/20 (25%)
leucine-rich repeat 182..205 CDD:275380 5/22 (23%)
LRR 7 205..226 8/20 (40%)
leucine-rich repeat 206..229 CDD:275380 9/22 (41%)
LRR 8 229..250 7/20 (35%)
leucine-rich repeat 230..253 CDD:275380 9/22 (41%)
LRR 9 253..274 6/20 (30%)
leucine-rich repeat 254..277 CDD:275380 7/22 (32%)
LRR 10 277..298 8/20 (40%)
leucine-rich repeat 278..301 CDD:275380 9/22 (41%)
LRR 11 301..322 8/26 (31%)
leucine-rich repeat 302..326 CDD:275380 8/29 (28%)
LRR 12 326..347 7/20 (35%)
leucine-rich repeat 327..348 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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