DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beta4GalNAcTA and b4galt3l2

DIOPT Version :9

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_002941069.2 Gene:b4galt3l2 / 733985 XenbaseID:XB-GENE-5823209 Length:355 Species:Xenopus tropicalis


Alignment Length:399 Identity:131/399 - (32%)
Similarity:196/399 - (49%) Gaps:85/399 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RFLAGAICLLLVL--------------NFVGFRSDGGSATSLSKLSIRRVHKYAHIYGNASSDGA 61
            |:|...:|:.||:              .|.|....||.| |:..::...|.:...:|.|.|    
 Frog     7 RYLLLFLCVQLVVMALLYREGYRKRVAYFFGIFYKGGPA-SMGLMNPHNVSQPGDVYANLS---- 66

  Fly    62 GGSEASRLPASPLALSKDRERDQELNGGPNSTIRTVIATANFTSIPQDLTRFLLGTKKFLPPRQK 126
                         .:||...|::|                                         
 Frog    67 -------------LISKSSLREEE----------------------------------------- 77

  Fly   127 STSALLANCTDPDPRDGGPITPNTTL-ESLDVIEAE-LGPLLRPGGAFEPENCNAQHHVAIVVPF 189
                 |..|.:..|..||||  ..|| |:|.:.|.| ..|.:..||.::|.:|.:.|..|:::|.
 Frog    78 -----LPFCPETSPYIGGPI--RVTLPENLLLEEVEKKNPYVSKGGRYKPPDCESTHKTAVIIPH 135

  Fly   190 RDRYAHLLLFLRNIHPFLMKQRIAYRIFIVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDV 254
            |.|..||...|..:||||.:|::.|.|:|:.|.....||||.::|:|:.||:|...|||..:|||
 Frog   136 RGREQHLKYLLYYLHPFLQRQQLNYGIYIIHQAGNFTFNRAKLLNVGFKEAMKDEDWDCLFYHDV 200

  Fly   255 DLLPLDDRNLYNCPRQPRHMSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNSFFGWGGED 319
            ||:|.||||:|.|.:.|:|.|:|:|...::|||:|.||||||::.|.:..:|||.|:::||||||
 Frog   201 DLIPEDDRNIYTCDKFPKHASIAMDKFGYKLPYKSYFGGVSALSPEQYMKMNGFPNNYWGWGGED 265

  Fly   320 DDMSNRLKHANLFISRYPVNIARYKMLKHQKEKA---NPKRYENLQNGMSKIEQDGINSIKYSIY 381
            ||:..|:..:.:.|||..:...||||:||..:|.   ||||:..|........|||:||::|.:.
 Frog   266 DDIGIRVALSGMIISRPSIQHGRYKMIKHGHDKGNEQNPKRFNMLTKTRRTWRQDGMNSLQYLLL 330

  Fly   382 SIKQFPTFT 390
            |.:..|.:|
 Frog   331 SKELQPLYT 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 94/213 (44%)
b4galt3l2XP_002941069.2 b4GalT 127..344 CDD:132999 94/213 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5217
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I3225
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201618at2759
OrthoFinder 1 1.000 - - FOG0002356
OrthoInspector 1 1.000 - - otm49006
Panther 1 1.100 - - O PTHR19300
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X405
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

Return to query results.
Submit another query.