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Protein Alignment beta4GalNAcTA and B4galt3

DIOPT Version :9

Sequence 1:	NP_610946.1	Gene:	beta4GalNAcTA / 36585	FlyBaseID:	FBgn0027538	Length:	403	Species:	Drosophila melanogaster
Sequence 2:	NP_065604.2	Gene:	B4galt3 / 57370	MGIID:	1928767	Length:	395	Species:	Mus musculus

Alignment Length:	404	Identity:	136/404 - (33%)
Similarity:	202/404 - (50%)	Gaps:	78/404 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 IRFLAGA-ICLLLVLNFVGFRSDGGSATSLSKLSIR---RVHKYAH---IYGNASSDGAGGSEAS 67
            :..|.|: :.:::.|:..|||       |||.|..|   ....|:|   :|.|          .|
Mouse    12 LALLVGSQLAVMMYLSLGGFR-------SLSALFGRDPGPTFDYSHPHDVYSN----------LS 59

  Fly    68 RLPASPLALSKDRERDQELNGGPNSTIRTVIATANFTSIPQDLTRFLLGTKKFLPPRQKSTSALL 132
            .|||:|.|..                                           .||.|     .|
Mouse    60 HLPAAPGAAG-------------------------------------------APPAQ-----AL 76

  Fly   133 ANCTDPDPRDGGPITPN-TTLESLDVIEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHL 196
            ..|.:..|...||::.: :.:.||..| .|..|.:..||.:.|..|..:...||:||.|.|..||
Mouse    77 PYCPERSPFLVGPVSVSFSPVPSLAEI-VERNPRVESGGRYRPAGCEPRSRTAIIVPHRAREHHL 140

  Fly   197 LLFLRNIHPFLMKQRIAYRIFIVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDD 261
            .|.|.::||||.:|::||.|:::.|.....||||.::|:|..|||:..:|||...|||||||.:|
Mouse   141 RLLLYHLHPFLQRQQLAYGIYVIHQAGNGTFNRAKLLNVGVREALRDEEWDCLFLHDVDLLPEND 205

  Fly   262 RNLYNC-PRQPRHMSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNSFFGWGGEDDDMSNR 325
            .|||.| ||.|||::||::...:.|||...||||||:|.:.:..:|||.|.::||||||||::.|
Mouse   206 HNLYVCDPRGPRHVAVAMNKFGYSLPYPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIATR 270

  Fly   326 LKHANLFISRYPVNIARYKMLKHQKEKA---NPKRYENLQNGMSKIEQDGINSIKYSIYSIKQFP 387
            ::.|.:.|||.|.::..|||:||:.:|.   ||.|::.|....:...|||:||:.|.:.:.:..|
Mouse   271 VRLAGMKISRPPTSVGHYKMVKHRGDKGNEENPHRFDLLVRTQNSWTQDGMNSLTYRLLARELGP 335

  Fly   388 TFTWYLAELKNSER 401
            .:|...|::....|
Mouse   336 LYTNITADIGTDPR 349

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.