DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beta4GalNAcTA and B4galt6

DIOPT Version :9

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_062711.1 Gene:B4galt6 / 56386 MGIID:1928380 Length:382 Species:Mus musculus


Alignment Length:290 Identity:108/290 - (37%)
Similarity:171/290 - (58%) Gaps:16/290 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 TANFTSIPQ--DLTRFLLGTKKFLPPRQKSTSALLANCTDPDPRDGGPITPNTTLESLDVI---- 158
            |.|.|..|:  :.:.:|:.|..:||  |..|......|.:..|...|.::.|.:..|.|.:    
Mouse    73 TLNGTDYPEGNNTSDYLVQTTTYLP--QNFTYLPHLPCPEKLPYMRGFLSVNVSEISFDEVHQLF 135

  Fly   159 --EAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIAYRIFIVEQ 221
              ::|:|    |||.:.|::|..:..||:::|||:|:.||.:|..::.|.|.|||:.:..:::||
Mouse   136 SKDSEIG----PGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLEFAFYVIEQ 196

  Fly   222 TNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQPRHMSVAIDTLNFRLP 286
            |..:|||||.:.|:|:.||:|...|||.||||||.||.:|||.|.|...|||.:..:|...:.||
Mouse   197 TGTQPFNRAMLFNVGFKEAMKDRAWDCVIFHDVDHLPENDRNYYGCGEMPRHFAAKLDKYMYILP 261

  Fly   287 YRSIFGGVSAMTREHFQAVNGFSNSFFGWGGEDDDMSNRLKHANLFISRYPVNIARYKML--KHQ 349
            |:..|||||.:|.|.|:.:|||.|:|:||||||||:.||:.:|...::|...::.:|..:  .|:
Mouse   262 YKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYISIPHHHR 326

  Fly   350 KEKANPKRYENLQNGMSKIEQDGINSIKYS 379
            .|.....||:.|:....:...||:|::.|:
Mouse   327 GEVQFLGRYKLLRYSKERQYIDGLNNLLYT 356

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 85/201 (42%)
B4galt6NP_062711.1 b4GalT 155..371 CDD:132999 85/202 (42%)
UDP-alpha-D-galactose binding. /evidence=ECO:0000250|UniProtKB:Q9UBV7 163..167 3/3 (100%)
UDP-alpha-D-galactose binding. /evidence=ECO:0000250|UniProtKB:Q9UBV7 202..204 1/1 (100%)