DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta4GalNAcTA and b4galt1.2

DIOPT Version :9

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001016664.1 Gene:b4galt1.2 / 549418 XenbaseID:XB-GENE-1015082 Length:362 Species:Xenopus tropicalis


Alignment Length:318 Identity:123/318 - (38%)
Similarity:186/318 - (58%) Gaps:43/318 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 NSTIRTVIATANFTSIPQDLTRFLLGTKKFLPPRQKSTSALLANCTDPDPRDGGPI----TPNTT 151
            |:|:|.:.....              ||:   |::|     |.||.:......||:    :.:..
 Frog    72 NATMRAISTKGR--------------TKE---PKEK-----LRNCPETSTLLVGPLQIVFSMHVD 114

  Fly   152 LESL-----DVIEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPFLMKQR 211
            ||.:     ||||         ||.:.|::|||...|||::|||:|..||..:|..:||.|.:|:
 Frog   115 LEDIRKSNPDVIE---------GGHYRPKDCNALQKVAIIIPFRNRDEHLKYWLYYMHPILKRQQ 170

  Fly   212 IAYRIFIVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQPRHMSV 276
            :.|.::::.|...|.||||.::||||:|:||.|.:|||:|.||||:|:||||.|.|..||||:|.
 Frog   171 LDYGVYVINQDGDKTFNRAKLLNIGYVESLKDYAYDCFVFSDVDLIPMDDRNTYRCFNQPRHLSA 235

  Fly   277 AIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNSFFGWGGEDDDMSNRLKHANLFISRYPVNIA 341
            |:|...|.|||...||||||:::|.|..:|||.|:::||||||||:.||:....::|||....|.
 Frog   236 AMDKFGFGLPYNQFFGGVSALSKEQFLKINGFPNNYWGWGGEDDDIYNRIASRGMYISRPDTLIG 300

  Fly   342 RYKMLKH---QKEKANPKRYENLQNGMSKIEQDGINSIKYSIYSIKQFPTFTWYLAEL 396
            |.:|::|   .|...||||::.|.:....::.||||::.|.:.|..:||.:|:...::
 Frog   301 RCRMIRHNRDDKNDPNPKRFDLLAHTRQTMDSDGINTLSYKVVSTTRFPLYTYITVDI 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 99/216 (46%)
b4galt1.2NP_001016664.1 b4GalT 140..357 CDD:132999 99/216 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5217
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I3225
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201618at2759
OrthoFinder 1 1.000 - - FOG0002356
OrthoInspector 1 1.000 - - otm49006
Panther 1 1.100 - - O PTHR19300
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X405
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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