DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta4GalNAcTA and b4galt6

DIOPT Version :9

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001016211.1 Gene:b4galt6 / 548965 XenbaseID:XB-GENE-984613 Length:383 Species:Xenopus tropicalis


Alignment Length:288 Identity:107/288 - (37%)
Similarity:167/288 - (57%) Gaps:10/288 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 ATANFTSIPQ--DLTRFLLGTKKFLPPRQKSTSALLANCTDPDPRDGGPITPNTT---LESLDVI 158
            ||.|.|..|.  :.|.|...:..:||  :..|.:....|.:..|...|..:.|.:   ||.:..:
 Frog    73 ATLNGTDFPDGTNSTEFTAQSSFYLP--ENFTFSPHLPCPEKLPFMRGQTSVNMSEIGLEDVYQL 135

  Fly   159 EAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIAYRIFIVEQTN 223
            .::...:.| ||.::|.:|..:..|||::|||:|:.||.:..|::.|.|.|||:.:..:::||..
 Frog   136 SSQDTHIER-GGHWKPNDCIPRWKVAILIPFRNRHEHLPILFRHLVPMLQKQRLEFAFYVIEQAG 199

  Fly   224 GKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQPRHMSVAIDTLNFRLPYR 288
            .:.||||.:.|||:.||:|..:|||.||||||.:|.:|||.|.|...|||.:..:|...:.|||.
 Frog   200 TQTFNRAMLFNIGFKEAMKDRKWDCVIFHDVDHIPENDRNYYGCGEMPRHFAAKLDKYMYILPYD 264

  Fly   289 SIFGGVSAMTREHFQAVNGFSNSFFGWGGEDDDMSNRLKHANLFISRYPVNIARYKML--KHQKE 351
            ..|||||.:|.|.|:.:|||.|:|:||||||||:.||:.:|...:||...:|.:||.:  .|:.|
 Frog   265 EFFGGVSGLTVEQFKKINGFPNAFWGWGGEDDDLWNRVHYAGYNVSRPEGDIGKYKSIPHHHRGE 329

  Fly   352 KANPKRYENLQNGMSKIEQDGINSIKYS 379
            .....||:.|:....:...||::::.|:
 Frog   330 VQFLGRYKLLRYSKERQYLDGLSNLIYA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 86/201 (43%)
b4galt6NP_001016211.1 b4GalT 156..372 CDD:132999 86/202 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201618at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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