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Protein Alignment beta4GalNAcTA and B4galt2

DIOPT Version :9

Sequence 1:	NP_610946.1	Gene:	beta4GalNAcTA / 36585	FlyBaseID:	FBgn0027538	Length:	403	Species:	Drosophila melanogaster
Sequence 2:	NP_001240310.1	Gene:	B4galt2 / 53418	MGIID:	1858493	Length:	369	Species:	Mus musculus

Alignment Length:	398	Identity:	139/398 - (34%)
Similarity:	206/398 - (51%)	Gaps:	65/398 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 RFLAG-------AICLLLVLNF-----VGFRSDGGSATSLSKLSIRRVHKYAH-IYGNASSDGAG 62
            |.|.|       |:.||.:|:|     :.|..........|:.|.|   ..|| :|..|||
Mouse     3 RLLGGTLERVCKAVLLLCLLHFLVAVILYFDVYAQHLAFFSRFSTR---SPAHALYPAASS---- 60

  Fly    63 GSEASRLPASPLALSKDRERDQELNGGPNSTIRTVIATANFTSIPQDLTRFLLGTKKFLPPRQKS 127
            .:..||                     ||:|    .|::....:|.              .|...
Mouse    61 STNCSR---------------------PNAT----AASSGLPEVPS--------------ARPGP 86

  Fly   128 TSALLANCTD-PDPRDGGPITPNTTLESLDVIEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRD 191
            |:.::..|.| |....|..:...|:...|:.::.| .|.:..||.:.|.:|.....||:::|||.
Mouse    87 TAPVIPPCPDVPPGLVGRVVIEFTSPMPLERVQRE-NPGVLLGGRYSPPDCTPAQTVAVIIPFRH 150

  Fly   192 RYAHLLLFLRNIHPFLMKQRIAYRIFIVEQTNGKPFNRAAMMNIGYLEALKL-YQWDCFIFHDVD 255
            |..||..:|..:||.|.:||:.|.::::.|...:.||||.::|:|:|||||. ..:|||||.|||
Mouse   151 REHHLRYWLHYLHPMLRRQRLRYGVYVINQHGEETFNRAKLLNVGFLEALKEDAAYDCFIFSDVD 215

  Fly   256 LLPLDDRNLYNCPRQPRHMSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNSFFGWGGEDD 320
            |:|:||||||.|..||||.::|:|...|||||.|.|||||.:::..|..:|||.|.::|||||||
Mouse   216 LVPMDDRNLYRCGDQPRHFAIAMDKFGFRLPYASYFGGVSGLSKAQFLRINGFPNEYWGWGGEDD 280

  Fly   321 DMSNRLKHANLFISRYPVNIARYKMLKHQKEK---ANPKRYENLQNGMSKIEQDGINSIKYSIYS 382
            |:.||:....:.|||..|.|.||:|:||.::|   .||:|:..:||....::.|||.|::|.:..
Mouse   281 DIFNRISLTGMKISRPDVRIGRYRMIKHDRDKHNEPNPQRFNKIQNTKMSMKWDGIGSVRYRVLE 345

  Fly   383 IKQFPTFT 390
            :.:.|.||
Mouse   346 VSRQPLFT 353

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.