DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beta4GalNAcTA and B4galt1

DIOPT Version :10

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_445739.1 Gene:B4galt1 / 24390 RGDID:620900 Length:399 Species:Rattus norvegicus


Alignment Length:396 Identity:135/396 - (34%)
Similarity:216/396 - (54%) Gaps:55/396 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AICLLLVLNFVGFRSDGGSATSLSKLSIRRVHKYAHIYGNASS--DGAGGSEASRLPAS------ 72
            |:|.|.:           ..|.:..||.|.:.:...:.|.:||  .|..|:.||:.|:.      
  Rat    28 AVCALHL-----------GVTLVYYLSGRDLSRLPQLVGVSSSLQGGTNGAAASKQPSGELRPRG 81

  Fly    73 -----PLALS-KDR---ERDQELNGGPNSTIRTVIATANFTSIPQDLTRFLLGTKKFLPPRQKST 128
                 ||.:| |.|   :...:...||.       ..:|.||:|...:..||             
  Rat    82 ARPPPPLGVSPKPRPGSDSSPDAASGPG-------LKSNLTSVPMPTSTGLL------------- 126

  Fly   129 SALLANCTDPDPRDGGPITPNTTLE-SLDVIEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDR 192
              .|..|.:..|...||:..:..:. .|::: |:..|.::.||.:.|::|.:.|.|||::|||:|
  Rat   127 --TLPACPEESPLLVGPMVIDFNIPVDLELL-AKKNPEIKMGGRYFPKDCISPHKVAIIIPFRNR 188

  Fly   193 YAHLLLFLRNIHPFLMKQRIAYRIFIVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLL 257
            ..||..:|..:||.|.:|::.|.|:::.|.....||||.::|:|:.||||.|.::||:|.||||:
  Rat   189 QEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTMFNRAKLLNVGFQEALKDYDYNCFVFSDVDLI 253

  Fly   258 PLDDRNLYNCPRQPRHMSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNSFFGWGGEDDDM 322
            |:||.|.|.|..||||:|||:|...|.|||...||||||::::.|..:|||.|:::||||||||:
  Rat   254 PMDDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDI 318

  Fly   323 SNRLKHANLFISRYPVNIARYKMLKHQKEK---ANPKRYENLQNGMSKIEQDGINSIKYSIYSIK 384
            .|||.|..:.|||....:.|.:|::|.::|   .||:|::.:.:....:..||:||:.|.:..|:
  Rat   319 FNRLVHKGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMRLDGLNSLTYQVLDIQ 383

  Fly   385 QFPTFT 390
            ::|.:|
  Rat   384 RYPLYT 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 95/213 (45%)
B4galt1NP_445739.1 b4GalT 176..394 CDD:132999 95/214 (44%)

Return to query results.
Submit another query.