DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta4GalNAcTA and bre-4

DIOPT Version :10

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_490872.1 Gene:bre-4 / 190668 WormBaseID:WBGene00000269 Length:383 Species:Caenorhabditis elegans


Alignment Length:369 Identity:155/369 - (42%)
Similarity:213/369 - (57%) Gaps:34/369 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VHKYAHIYGNASSDGAGGSE-ASRLPASPLALSKDRERDQELNGGPNSTIRTVIATANFTSIPQD 109
            ::|...:|.|.:   .|.|. .:.:.|....|........:|....|||. :.|:..|.||..:|
 Worm    28 IYKIPSLYENLT---IGSSTLIADVDAMEAVLGNTASTSDDLLDTWNSTF-SPISEVNQTSFMED 88

  Fly   110 LTRFLLGTKKFLPPRQKSTSALLANCTDPDPRDGGPI-----TPN-TTLESLDVIEAELGPLLRP 168
            :...|      .|..|     .|..|....|...|||     .|: .|||       ::.|....
 Worm    89 IRPIL------FPDNQ-----TLQFCNQTPPHLVGPIRVFLDEPDFKTLE-------KIYPDTHA 135

  Fly   169 GGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIAYRIFIVEQTNGKPFNRAAMM 233
            ||...|::|.|:|.|||:||:|||.|||.:.|.|:|..|.||::.|.||||||...:.|||..:|
 Worm   136 GGHGMPKDCVARHRVAIIVPYRDREAHLRIMLHNLHSLLAKQQLDYAIFIVEQVANQTFNRGKLM 200

  Fly   234 NIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQPRHMSVAIDTLNFRLPYRSIFGGVSAMT 298
            |:||..|.:||.|.|||||||||||.||||||.||.||||||||||..|::|||.:||||:||:|
 Worm   201 NVGYDVASRLYPWQCFIFHDVDLLPEDDRNLYTCPIQPRHMSVAIDKFNYKLPYSAIFGGISALT 265

  Fly   299 REHFQAVNGFSNSFFGWGGEDDDMSNRLKHANLFISRYPVNIARYKMLKHQKEKANPK---RYEN 360
            ::|.:.:|||||.|:||||||||::.|...|.|.:||||..||||||:||..|..||.   ||:.
 Worm   266 KDHLKKINGFSNDFWGWGGEDDDLATRTSMAGLKVSRYPTQIARYKMIKHSTEATNPVNKCRYKI 330

  Fly   361 LQNGMSKIEQDGINSIKYSIYSIKQFPTFTWYLAEL--KNSERK 402
            :.....:..:||::::||.:.:::..|.:|..:.:|  |:..|:
 Worm   331 MGQTKRRWTRDGLSNLKYKLVNLELKPLYTRAVVDLLEKDCRRE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 117/216 (54%)
bre-4NP_490872.1 b4GalT 147..365 CDD:132999 117/217 (54%)

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