DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta4GalNAcTA and W02B12.11

DIOPT Version :9

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_496449.1 Gene:W02B12.11 / 174754 WormBaseID:WBGene00012206 Length:387 Species:Caenorhabditis elegans


Alignment Length:279 Identity:103/279 - (36%)
Similarity:154/279 - (55%) Gaps:28/279 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 TDPDP------RDGG-PIT----------PNTTLESLDVIEAE---LGPLLRPGGAFEPENCNAQ 180
            |.|.|      .||. ||.          |..||...::.|.|   :.|.|.|||:::|::|.|:
 Worm    94 TKPKPPVKIAEEDGSCPIVEKIPDLQGALPQATLLIQNLQEGEVHAIHPELGPGGSWKPDDCQAR 158

  Fly   181 HHVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIAYRIFIVEQTNGKPFNRAAMMNIGYL--EALKL 243
            ..:|:::|:|:|..||...:..:.|.|.:||:.:|..:.||.....||:..:||..::  |:|.:
 Worm   159 DKIAVIIPYRERQTHLTRLIDFLIPILQRQRLDFRFIVTEQYGNDLFNKGRIMNAAFIFAESLGV 223

  Fly   244 YQWDCFIFHDVDLLPLDDRNLYNCPRQPRHMSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGF 308
               ||.:|||||:.|.||||.|:||..|||:...:..|.::|.|:.|.|||.|::...::||||:
 Worm   224 ---DCVVFHDVDMFPQDDRNPYSCPPGPRHLGAFVSNLGYQLWYKEIVGGVLAVSMADYRAVNGY 285

  Fly   309 SNSFFGWGGEDDDMSNRLKHANLFISRYPVNIARYKMLKHQKEKAN-PKR-YENLQNGMSKIEQD 371
            ||.|:.||||||||..|:...|..|.|......||.||||.|.|.. ||. |:.|.|..:::..|
 Worm   286 SNQFWAWGGEDDDMGQRILSLNYTIERPNPETGRYSMLKHVKRKRTAPKLIYKLLGNSANRVAYD 350

  Fly   372 GINSI-KYSIYSIKQFPTF 389
            |:|.. |::|..:...|.:
 Worm   351 GLNETDKWTIRKVTTRPLY 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 83/214 (39%)
W02B12.11NP_496449.1 b4GalT 158..375 CDD:132999 83/215 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3916
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201618at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103240
Panther 1 1.100 - - O PTHR19300
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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