back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment beta4GalNAcTA and B4galt1

DIOPT Version :9

Sequence 1:	NP_610946.1	Gene:	beta4GalNAcTA / 36585	FlyBaseID:	FBgn0027538	Length:	403	Species:	Drosophila melanogaster
Sequence 2:	NP_071641.1	Gene:	B4galt1 / 14595	MGIID:	95705	Length:	399	Species:	Mus musculus

Alignment Length:	396	Identity:	136/396 - (34%)
Similarity:	217/396 - (54%)	Gaps:	55/396 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 AICLLLVLNFVGFRSDGGSATSLSKLSIRRVHKYAHIYGNASS--DGAGGSEASRLPAS------ 72
            |:|.|.:           ..|.:..||.|.:.:...:.|.:|:  .|..|:.||:.|..
Mouse    28 AVCALHL-----------GVTLVYYLSGRDLSRLPQLVGVSSTLQGGTNGAAASKQPPGEQRPRG 81

  Fly    73 -----PLALS-KDR---ERDQELNGGPNSTIRTVIATANFTSIPQDLTRFLLGTKKFLPPRQKST 128
                 ||.:| |.|   :.......||.       ..:|.:|:|...|..||.
Mouse    82 ARPPPPLGVSPKPRPGLDSSPGAASGPG-------LKSNLSSLPVPTTTGLLS------------ 127

  Fly   129 SALLANCTDPDPRDGGPITPNTTLESLDV-IEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDR 192
               |..|.:..|...||:..:..: ::|: :.|:..|.::.||.:.|::|.:.|.|||::|||:|
Mouse   128 ---LPACPEESPLLVGPMLIDFNI-AVDLELLAKKNPEIKTGGRYSPKDCVSPHKVAIIIPFRNR 188

  Fly   193 YAHLLLFLRNIHPFLMKQRIAYRIFIVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLL 257
            ..||..:|..:||.|.:|::.|.|:::.|.....||||.::|||:.||||.|.::||:|.||||:
Mouse   189 QEHLKYWLYYLHPILQRQQLDYGIYVINQAGDTMFNRAKLLNIGFQEALKDYDYNCFVFSDVDLI 253

  Fly   258 PLDDRNLYNCPRQPRHMSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNSFFGWGGEDDDM 322
            |:||||.|.|..||||:|||:|...|.|||...||||||::::.|.|:|||.|:::||||||||:
Mouse   254 PMDDRNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLAINGFPNNYWGWGGEDDDI 318

  Fly   323 SNRLKHANLFISRYPVNIARYKMLKHQKEK---ANPKRYENLQNGMSKIEQDGINSIKYSIYSIK 384
            .|||.|..:.|||....:.|.:|::|.::|   .||:|::.:.:....:..||:||:.|.:..::
Mouse   319 FNRLVHKGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMRFDGLNSLTYKVLDVQ 383

  Fly   385 QFPTFT 390
            ::|.:|
Mouse   384 RYPLYT 389

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.