DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta4GalNAcTA and b4galt2

DIOPT Version :9

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_002931518.2 Gene:b4galt2 / 100492356 XenbaseID:XB-GENE-997913 Length:374 Species:Xenopus tropicalis


Alignment Length:407 Identity:142/407 - (34%)
Similarity:214/407 - (52%) Gaps:74/407 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIRFLAG--------AICLLLVLNFV----------GFRSDGGSATSLSKLSIRRVHKYAHIYGN 55
            :.|.|.|        |:.||.:::||          ..|.|     ..::.:||...: ||.|.|
 Frog     1 MTRLLLGVTLERICKAVLLLCLVHFVIIMILYFDVYAQRLD-----FFTRFNIRNTSR-AHPYYN 59

  Fly    56 ASSDGAGGSEASRLPASPLALSKDRERDQELNGGPNSTIR--TVIATANFTSIPQ-DLTRFLLGT 117
            .|.                               ||.|:.  |.:.:|..:..|. .|...|..|
 Frog    60 FSR-------------------------------PNGTVHSYTAVISAGDSFTPSAKLELNLTVT 93

  Fly   118 KKFLPPRQKSTSALLANCTDPDPR-DGGPITPNTTLESLDVIEAELGPLLRPGGAFEPENCNAQH 181
            :|.|         ||  |.|..|. .|..:...::|.|::.::.| .|.:..||.:.|.:|..:.
 Frog    94 EKPL---------LL--CPDAPPELVGRLLIEFSSLMSMERVQRE-NPDVTEGGRYTPPDCQPKE 146

  Fly   182 HVAIVVPFRDRYAHLLLFLRNIHPFLMKQRIAYRIFIVEQTNGKPFNRAAMMNIGYLEALKLYQW 246
            .|||::|||.|..||..:|..:||.|.:|::||.|:|:.|.....||||.::|:|:|||:|...:
 Frog   147 KVAIIIPFRHREHHLKYWLHYLHPILRRQKVAYGIYIINQFGEDTFNRAKLLNVGFLEAMKEADY 211

  Fly   247 DCFIFHDVDLLPLDDRNLYNCPRQPRHMSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNS 311
            |||||.||||:|:||||||:|..||||.::|:|...|||||...|||||.:::..|..:|||.|.
 Frog   212 DCFIFSDVDLIPMDDRNLYHCYEQPRHFAIAMDKFGFRLPYAGYFGGVSGLSKAQFLKINGFPNE 276

  Fly   312 FFGWGGEDDDMSNRLKHANLFISRYPVNIARYKMLKHQKEK---ANPKRYENLQNGMSKIEQDGI 373
            ::||||||||:.||:....:.|||..:.|.||:|:||:::|   .||:|:..:||....:::|||
 Frog   277 YWGWGGEDDDIYNRITLNGMKISRPDIRIGRYRMIKHERDKHNEPNPQRFTKIQNTKMTMKKDGI 341

  Fly   374 NSIKYSIYSIKQFPTFT 390
            ||:.|.:....::|.:|
 Frog   342 NSLHYRVIHSAKYPMYT 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 100/213 (47%)
b4galt2XP_002931518.2 b4GalT 145..363 CDD:132999 100/214 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5217
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2804
Inparanoid 1 1.050 243 1.000 Inparanoid score I3225
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201618at2759
OrthoFinder 1 1.000 - - FOG0002356
OrthoInspector 1 1.000 - - otm49006
Panther 1 1.100 - - O PTHR19300
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2427
SonicParanoid 1 1.000 - - X405
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

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