DRSC/TRiP Functional Genomics Resources

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Protein Alignment beta4GalNAcTA and b4galt4

DIOPT Version :9

Sequence 1:NP_610946.1 Gene:beta4GalNAcTA / 36585 FlyBaseID:FBgn0027538 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_004912330.1 Gene:b4galt4 / 100488464 XenbaseID:XB-GENE-953813 Length:350 Species:Xenopus tropicalis


Alignment Length:392 Identity:132/392 - (33%)
Similarity:206/392 - (52%) Gaps:67/392 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LLVLNFVGFRSDGGSATSLSKLSIRRVHKYAH--------IYGNASSDGAGGSEASRLPASPLAL 76
            :||:..:|....|.:|     |::..|.:|||        .:.:.|.:.|...:..|.||.    
 Frog    14 MLVIISLGLLLLGWAA-----LNLPHVARYAHRSKQLMDYRWRDISMERASEKQEERAPAG---- 69

  Fly    77 SKDRERDQELNGGPNSTIRTVIATANFTSIPQDLTRFLLGTKKFLPPRQKSTSALLANCTDPDPR 141
                               .|:.||.             ..:|..|    :.|.||        |
 Frog    70 -------------------LVMETAK-------------EPEKLCP----ALSPLL--------R 90

  Fly   142 DGGPITPNTTLESLDVIEAELGPLLRPGGAFEPENCNAQHHVAIVVPFRDRYAHLLLFLRNIHPF 206
            ...|:....:| |::.::.| .|.:. .|.|:||.|.:|..|||::|.|:|..|||..|:::|||
 Frog    91 GAVPLKFEPSL-SVNQVKKE-NPQVE-NGRFQPEGCKSQQKVAILIPHRNRERHLLYLLKHLHPF 152

  Fly   207 LMKQRIAYRIFIVEQTNGKPFNRAAMMNIGYLEALKLYQWDCFIFHDVDLLPLDDRNLYNCPRQP 271
            |.:|::.|.|:::.||..:.||||.::|||||||||...|||||||||||:|.:|.|||.|..:|
 Frog   153 LQRQQLDYGIYVIHQTGNQKFNRAKLLNIGYLEALKEEDWDCFIFHDVDLIPENDFNLYLCDTEP 217

  Fly   272 RHMSVAIDTLNFRLPYRSIFGGVSAMTREHFQAVNGFSNSFFGWGGEDDDMSNRLKHANLFISRY 336
            :|:.|..:...::|.|:..||||:|||||.||.|||:||.::||||||||:..|:....:.:.|.
 Frog   218 KHLVVGRNVTGYKLRYKGYFGGVTAMTREQFQKVNGYSNKYWGWGGEDDDLRQRVVVQKMTVVRP 282

  Fly   337 PVNIARYKMLKHQKEKANPKRYENLQ--NGMSKI-EQDGINSIKYSIYSIKQFPTFTWYLAELKN 398
            |..:|||.|:.|.::..|....:.::  :.:|:: .:||:||..|.:.|::....:..:.||:..
 Frog   283 PAEVARYTMIFHTRDSGNEVNSQRMKLLDKVSRVWRKDGLNSCSYKLLSVEHEQLYVNFTAEVGR 347

  Fly   399 SE 400
            .|
 Frog   348 PE 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta4GalNAcTANP_610946.1 b4GalT 181..395 CDD:132999 94/216 (44%)
b4galt4XP_004912330.1 b4GalT 127..344 CDD:132999 94/216 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5217
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I3225
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201618at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49006
Panther 1 1.100 - - O PTHR19300
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2427
SonicParanoid 1 1.000 - - X405
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.100

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