DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-5 and LHS1

DIOPT Version :9

Sequence 1:NP_001286414.1 Gene:Hsc70-5 / 36583 FlyBaseID:FBgn0001220 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_012850.1 Gene:LHS1 / 853789 SGDID:S000001556 Length:881 Species:Saccharomyces cerevisiae


Alignment Length:655 Identity:152/655 - (23%)
Similarity:260/655 - (39%) Gaps:125/655 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 AVIGIDLGTTNSCLAVMEGKQA--KVIENAEGARTTPSHVA------FTKDG----ERLVGMPAK 105
            ||:|:|.|..| ..|::...||  :::...|..|...|.::      :.||.    ||:.|....
Yeast    21 AVLGVDYGQQN-IKAIVVSPQAPLELVLTPEAKRKEISGLSIKRLPGYGKDDPNGIERIYGSAVG 84

  Fly   106 RQAVTNSANTFYATKRLIGRRFDDPEVKKDITNLSYKVVKASNGDAWVSS--------TDGKVYS 162
            ..|.....||....|.|:|:..:|     :.|...|.  |...|...||:        .|...|.
Yeast    85 SLATRFPQNTLLHLKPLLGKSLED-----ETTVTLYS--KQHPGLEMVSTNRSTIAFLVDNVEYP 142

  Fly   163 PSQIGAFILMKMKETAEAYLNTP-------VKNAVVTVPAYFNDSQRQATKDAGQI-AGLNVLRV 219
            ..::.|..:.::...|.:.|...       |.....|:|.:|:..||:|..||..| .|:....:
Yeast   143 LEELVAMNVQEIANRANSLLKDRDARTEDFVNKMSFTIPDFFDQHQRKALLDASSITTGIEETYL 207

  Fly   220 INEPTAAALAYGMDKT-----EDKIIAVYDLGGGTFDISILEI-------QKGVFEVKSTNGDTL 272
            ::|..:.|:.:.:.:.     |.:...|||:|.|:...|:..|       |....|.:....:..
Yeast   208 VSEGMSVAVNFVLKQRQFPPGEQQHYIVYDMGSGSIKASMFSILQPEDTTQPVTIEFEGYGYNPH 272

  Fly   273 LGGEDFDNHIVNFLVAEFKKDSGIDIRKDNI-----AMQRLKEAAEKAKCELSSSQQTDINLPYL 332
            |||..|...|.:.:..:| .::...||.|.:     |:.::.:||||||..||::.:..||:..|
Yeast   273 LGGAKFTMDIGSLIENKF-LETHPAIRTDELHANPKALAKINQAAEKAKLILSANSEASINIESL 336

  Fly   333 TMDAAGPQHMNLKLTRSKLESLVGDLIKRTIQPCQKALSDAEVSKS---------EIGEVLLVGG 388
            ..|.    .....:||.:.|..:.|.:...::|    ::|| |:|.         ||..|:|.||
Yeast   337 INDI----DFRTSITRQEFEEFIADSLLDIVKP----INDA-VTKQFGGYGTNLPEINGVILAGG 392

  Fly   389 MTRMPKVQSTVQELFGRQP-SRSVNPDEAVAVGAAVQGGVLAGDVTDVLLLDVTPLSLGI----- 447
            .:|:|.||..:.:|...:. .|:||.||: ||...|..|:...:......|:|...|:..     
Yeast   393 SSRIPIVQDQLIKLVSEEKVLRNVNADES-AVNGVVMRGIKLSNSFKTKPLNVVDRSVNTYSFKL 456

  Fly   448 ---ETLGGVFTRLISRNTTIPTKKSQVFSTASDGQTQVEIKVHQG----EREMANDNKLLGSFTL 505
               ..|..|||    |.:..|.|.|.:.:|.........|.:.:.    |....|...:..|:: 
Yeast   457 SNESELYDVFT----RGSAYPNKTSILTNTTDSIPNNFTIDLFENGKLFETITVNSGAIKNSYS- 516

  Fly   506 VGIPPAPRGVPQIEVVFDIDANGIVHV--------SAKDKGTGKEQQIVIQSSG---GLSKDEIE 559
              ......|| ...:.||:.::.:..:        |..|.|..|:    |::.|   ..:.:::|
Yeast   517 --SDKCSSGV-AYNITFDLSSDRLFSIQEVNCICQSENDIGNSKQ----IKNKGSRLAFTSEDVE 574

  Fly   560 NMIKKA---------EEYATADKQKRELI---EIVNQGESIVHDTETKM--EEFKSQLPAEECEK 610
              ||:.         |.....|||.:|..   |.:|..||.::|....:  :|.....|..:.|:
Yeast   575 --IKRLSPSERSRLHEHIKLLDKQDKERFQFQENLNVLESNLYDARNLLMDDEVMQNGPKSQVEE 637

  Fly   611 LKKEI 615
            |.:.:
Yeast   638 LSEMV 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-5NP_001286414.1 dnaK 51..666 CDD:234715 152/655 (23%)
HSPA9-like_NBD 51..428 CDD:212683 109/429 (25%)
Syntaphilin <566..>642 CDD:291936 14/55 (25%)
LHS1NP_012850.1 HYOU1-like_NBD 23..430 CDD:212672 106/425 (25%)
Smc <581..737 CDD:224117 14/62 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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