DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-5 and SSB1

DIOPT Version :9

Sequence 1:NP_001286414.1 Gene:Hsc70-5 / 36583 FlyBaseID:FBgn0001220 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_010052.1 Gene:SSB1 / 851369 SGDID:S000002388 Length:613 Species:Saccharomyces cerevisiae


Alignment Length:612 Identity:290/612 - (47%)
Similarity:395/612 - (64%) Gaps:28/612 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GEVKGAVIGIDLGTTNSCLAVMEGKQAKVIENAEGARTTPSHVAFTKDGERLVGMPAKRQAVTNS 112
            |..:|| ||||||||.||:|..| ...::|.|.:|.|.|||.||||.: |||:|..||.||..|.
Yeast     4 GVFQGA-IGIDLGTTYSCVATYE-SSVEIIANEQGNRVTPSFVAFTPE-ERLIGDAAKNQAALNP 65

  Fly   113 ANTFYATKRLIGRRFDDPEVKKDITNLSYKVVKASNGDA----WVSSTDGKVYSPSQIGAFILMK 173
            .||.:..||||||||||..|:||:....:||:.......    ::..|  |.:||.:|.|.:|.|
Yeast    66 RNTVFDAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEET--KTFSPQEISAMVLTK 128

  Fly   174 MKETAEAYLNTPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGM--DKTE 236
            |||.|||.:...|:.||:||||||||:|||||||||.|:||||||:||||||||:|||:  .|:|
Yeast   129 MKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSE 193

  Fly   237 -DKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTLLGGEDFDNHIVNFLVAEFKKDSGIDIRK 300
             ::.:.::||||||||:|:|.|..||:.||||:|:|.|||:|||.:::....|||||.:|:||..
Yeast   194 KERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISD 258

  Fly   301 DNIAMQRLKEAAEKAKCELSSSQQTDINLPYLTMDAAGPQHMNLKLTRSKLESLVGDLIKRTIQP 365
            |..|::||:.|||:||..|||..||.:.:..| .|.   :.....|||::.|.|...|.|.|::|
Yeast   259 DARALRRLRTAAERAKRTLSSVTQTTVEVDSL-FDG---EDFESSLTRARFEDLNAALFKSTLEP 319

  Fly   366 CQKALSDAEVSKSEIGEVLLVGGMTRMPKVQSTVQELF-GRQPSRSVNPDEAVAVGAAVQGGVLA 429
            .::.|.||::|||:|.||:||||.||:||||..:.:.| |:|..:|:|||||||.||||||.:|.
Yeast   320 VEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILT 384

  Fly   430 GDVT-----DVLLLDVTPLSLGIETLGGVFTRLISRNTTIPTKKSQVFSTASDGQTQVEIKVHQG 489
            |..|     |:|||||.|||||:...|.:|..::.||||:||.|.:.|:|.:|.||.|:..|:||
Yeast   385 GQSTSDETKDLLLLDVAPLSLGVGMQGDMFGIVVPRNTTVPTIKRRTFTTCADNQTTVQFPVYQG 449

  Fly   490 EREMANDNKLLGSFTLVGIPPAPRGVPQIEVVFDIDANGIVHVSAKDKGTGKEQQIVIQSS-GGL 553
            ||....:|.|||.|.|..||..|.|.|.:|.:|::|||||:.|:|.:|.|||...|.|.:: |.|
Yeast   450 ERVNCKENTLLGEFDLKNIPMMPAGEPVLEAIFEVDANGILKVTAVEKSTGKSSNITISNAVGRL 514

  Fly   554 SKDEIENMIKKAEEYATADKQKRELIEIVNQGESIVHDTETKMEE--FKSQLPAEECEKLKKEIA 616
            |.:|||.|:.:|||:..||:...:..|...:.||.|...|..:.:  ..|:|......|::..::
Yeast   515 SSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALS 579

  Fly   617 D-LRTLLANKETADLEEVRKATSSLQQ 642
            | |..|.....:||  |:|||...|::
Yeast   580 DALAALQIEDPSAD--ELRKAEVGLKR 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-5NP_001286414.1 dnaK 51..666 CDD:234715 289/609 (47%)
HSPA9-like_NBD 51..428 CDD:212683 199/384 (52%)
Syntaphilin <566..>642 CDD:291936 22/78 (28%)
SSB1NP_010052.1 PTZ00009 6..575 CDD:240227 279/577 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.