DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-5 and hspa12a.2

DIOPT Version :9

Sequence 1:NP_001286414.1 Gene:Hsc70-5 / 36583 FlyBaseID:FBgn0001220 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_003198604.1 Gene:hspa12a.2 / 559237 ZFINID:ZDB-GENE-061009-20 Length:571 Species:Danio rerio


Alignment Length:626 Identity:148/626 - (23%)
Similarity:257/626 - (41%) Gaps:155/626 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 IGIDLGTTNSCLAV----MEGKQAKVIEN---AEGART--TPS------HVAFTKDGERLVGMPA 104
            |.||.||:.|..|:    .:.:::.:|.|   ..|..|  ||:      |..|.|.|...: |..
Zfish     8 IAIDFGTSYSGYAISFKTKQPQESILIPNWGVDYGYNTFKTPTCILFDEHETFQKFGYDAM-MTY 71

  Fly   105 KRQAVTNSANTFYATKRLIGRRFD----DPEVKKDITNLSYKVVKASNGDAWVSSTDGKVYSPS- 164
            .|..|.:.|.     |..:...|.    |.|:.:|:      ::.|.||....:.|   |:|.| 
Zfish    72 TRSTVKSQAR-----KSFLFEHFKMELYDKEIHRDL------MITAKNGGQMKALT---VFSESL 122

  Fly   165 -QIGAFILMKMKE--TAEAYLNTPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNV------LRVI 220
             .:....|.|:||  |.:.::.:.| ..|:||||.:|.:.:|..::|...|||.:      |...
Zfish   123 RYLKDHALEKVKENPTGKTFIASDV-TWVLTVPAIWNAAAKQFMREAAIEAGLVIESEPERLVFA 186

  Fly   221 NEPTAAAL------AYG-------MDKTEDK---IIAVYDLGGGTFDISILEIQKG--VFEVKST 267
            .||.||::      :.|       .|..|.|   ...|.|.||||.||::.|:.:.  :.|:.:.
Zfish   187 LEPEAASIYCKHLPSEGYISEEACRDTLEQKPGTQYMVVDCGGGTIDITVHEVVEDGKLKELNAA 251

  Fly   268 NGDTLLGGEDFDNHIVNFL--------VAEFKKD---SGIDIRKDNIAMQR-------------L 308
            :|:. :||:..|...::||        ..:|::|   ..:.::.| ||:.:             |
Zfish   252 SGND-MGGQTVDRKFISFLKEIFSEKIYNKFEQDFPAEALKLKYD-IALAKSCDQLVLIQCPVTL 314

  Fly   309 KEAAEKAKCELSSSQQTDINLPYLTMDAAGPQHMNLKLTRSKLESLVGDLIKRTIQPCQKALSDA 373
            :|.|:|.|.         |...:..::.|.....::.:...||:|...:.:|.|.:..:|..|:.
Zfish   315 QELAKKEKA---------IESYFEGVEGAEWDEGSIIIKEDKLQSFFDESLKTTAEKLEKITSNP 370

  Fly   374 EVSKSEIGEVLLVGGMTRMPKVQSTVQELFGRQPSRSVNPDEAVAVGAAVQGGVLAGDVTDVLLL 438
            |::   |..:|||||......::..::|.|.:  .:.|.|.|...|  .::|.:.......|:..
Zfish   371 ELN---IEYMLLVGGFAECKILKKFLKERFDK--CKIVCPVEPQVV--IIKGAIRYAKQPKVVKS 428

  Fly   439 DVTPLSLGIETLGGVFTRLISRNTTIPTKKSQVFSTASDGQTQVEI----KVHQGEREMANDNKL 499
            .::.|:.||. :...|.:::.::      ||...:  |:|||..::    .|.:|  |..|.:::
Zfish   429 RMSALTYGIR-IDAPFDKVLHKD------KSNYVN--SEGQTYCDVCFETFVRKG--ESVNCDEV 482

  Fly   500 LGSFTLVGIPPAPRGVPQIEVVFD-----------IDANGIVHVSAKDKGTGKEQQIVIQSSGGL 553
            ...|.      .|....|...:|.           ||..|:..|...:.|..|       :.|||
Zfish   483 RQFFF------NPSHTNQTSAIFQFFSTNEKQVQFIDEPGVEPVGFFEVGMPK-------TDGGL 534

  Fly   554 SKD-EIENMIKKAEEYATADKQKRELIEIVNQGE--SIVHD 591
            |:: ::|......|..|||..        |:.||  |:.||
Zfish   535 SREIKLEIKFGSTEMKATATD--------VDSGETTSVKHD 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-5NP_001286414.1 dnaK 51..666 CDD:234715 148/626 (24%)
HSPA9-like_NBD 51..428 CDD:212683 108/443 (24%)
Syntaphilin <566..>642 CDD:291936 10/28 (36%)
hspa12a.2XP_003198604.1 HSPA12_like_NBD 6..420 CDD:212671 108/445 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.