DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-5 and hspa13

DIOPT Version :9

Sequence 1:NP_001286414.1 Gene:Hsc70-5 / 36583 FlyBaseID:FBgn0001220 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001017223.1 Gene:hspa13 / 549977 XenbaseID:XB-GENE-963595 Length:476 Species:Xenopus tropicalis


Alignment Length:427 Identity:146/427 - (34%)
Similarity:233/427 - (54%) Gaps:55/427 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VIGIDLGTTNSCLAVME--GKQAKVIENAEGARTTPSHVAFTKDGERLVGMPAKRQAVTNSANTF 116
            |||||||||...:.|..  ..:.:||.:..|.::.||.|:|| :.:..||......|..|..||.
 Frog    33 VIGIDLGTTYCSVGVFHPGTGEVRVITDENGHQSIPSIVSFT-EKDVFVGYDGLELADANPQNTI 96

  Fly   117 YATKRLIGRRFDDPEVKKDITNLSYKVVKASNGDAW--VSSTDGKVYSPSQIGAFILMKMKETAE 179
            |..||.||:.|...|::|:.....:||:. .|||.:  ||:.:....:|..|.:.:|:|:|:.||
 Frog    97 YDAKRFIGKIFTQEELEKESVRYQFKVLN-RNGDVFFSVSTNETFAVTPEYISSQLLLKLKKMAE 160

  Fly   180 AYLNTPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGMDKTEDKIIAVYD 244
            .||..||..||::|||.|::.||..|..|..:|||::|||||||||||:|||:.|.:...:.|.|
 Frog   161 DYLGLPVSKAVISVPAEFDERQRNYTVKAANLAGLDILRVINEPTAAAMAYGLHKVDVFNVLVVD 225

  Fly   245 LGGGTFDISILEIQKGVFEVKSTNGDTLLGGEDFDNHIVNFLVAE-FKKDSGIDIRKDNIAMQRL 308
            |||||.|:|:|..|.|:|..::..|:..|||:||:..::.:|..: :.:...:..:|:.|  .||
 Frog   226 LGGGTLDVSLLNKQGGMFLTRAMAGNNKLGGQDFNQRLLQYLYDKIYTRYGSVPSQKEEI--HRL 288

  Fly   309 KEAAEKAKCELSSSQQTDINLPYLTM------------------------------------DAA 337
            ::|.|..|..|:....:.:.:| ||:                                    .::
 Frog   289 RQAVEAIKLNLTLHNSSWVRMP-LTLASTHPDSSKPDKIIPNESLENTGEIHPKSAHLGDSYSSS 352

  Fly   338 GPQHMN---------LKLTRSKLESLVGDLIKRTIQPCQKALSDAEVSKSEIGEVLLVGGMTRMP 393
            |||..|         :::||...|:|..||.::.:.|.::.|.:..|.|.|:.|::||||.||:|
 Frog   353 GPQIQNKHAEKVYFEMEITRHIFETLNEDLFQKILIPVEQVLKEGHVLKEEVDEIVLVGGSTRIP 417

  Fly   394 KVQSTVQELFGRQPSRSVNPDEAVAVGAAVQGGVLAG 430
            :::..:::.||:.|:.||:||.||..|.|:|.|::.|
 Frog   418 RIRQVIRDFFGKDPNTSVDPDLAVVTGVAIQAGIMGG 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-5NP_001286414.1 dnaK 51..666 CDD:234715 146/427 (34%)
HSPA9-like_NBD 51..428 CDD:212683 145/423 (34%)
Syntaphilin <566..>642 CDD:291936
hspa13NP_001017223.1 HSPA13-like_NBD 23..468 CDD:212679 146/427 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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