DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-5 and Hspa12b

DIOPT Version :9

Sequence 1:NP_001286414.1 Gene:Hsc70-5 / 36583 FlyBaseID:FBgn0001220 Length:686 Species:Drosophila melanogaster
Sequence 2:NP_001381945.1 Gene:Hspa12b / 311427 RGDID:1312004 Length:685 Species:Rattus norvegicus


Alignment Length:735 Identity:152/735 - (20%)
Similarity:256/735 - (34%) Gaps:238/735 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PKFLPRLARQAGVVPSHMSGASSMFRNLPGASNGISSQLRYKSGEVKGAVIGIDLGTTNSCLA-- 67
            |...||.....|:.|.             ..|.....::|.........|:.||.|||:|..|  
  Rat    26 PPGSPRTQESCGIAPL-------------TPSQSPKPEVRAPQRASFSVVVAIDFGTTSSGYAFS 77

  Fly    68 -VMEGKQAKVIENAEGA------RTTPSHVAFTKDGERLVGMPAKRQAVTNS----ANTFYATKR 121
             ..:.:...::...||.      :.||:.:..|.:|            :.:|    |..:|... 
  Rat    78 FATDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEG------------IFHSFGYTARDYYHDL- 129

  Fly   122 LIGRRFDDPEVKKD-------------ITNLSYKV-VKASNGDAWVSSTDGKVYSPSQ--IGAFI 170
                   |||..:|             .|:|:.|. ::|.||...::.   :|::.:.  .....
  Rat   130 -------DPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKKMLAL---EVFAHALRFFKEHA 184

  Fly   171 LMKMKETAEAYLNTPVKNAVVTVPAYFNDSQRQATKDAGQIAGL------NVLRVINEPTAAAL- 228
            |.:::|.:|..|.......|:||||.:....:|..::|..:|||      ..|.:..||.||:: 
  Rat   185 LQELREQSECMLEKDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDAEKLLIALEPEAASVY 249

  Fly   229 ----------------AYG---------------------------------------MDKTEDK 238
                            |.|                                       .:..|..
  Rat   250 CRKLRLHQLMDLSSRTAGGGRLGERRSIDSSFRHAREQLRRSRHSRTFLVESGVGELWSEMQEGD 314

  Fly   239 IIAVYDLGGGTFDISI--LEIQKGVFE--VKSTNG-----------DTLL---GGEDFDNHIVNF 285
            ...|.|.||||.|:::  ||...|..:  .|::.|           :.||   .||||       
  Rat   315 RYMVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDF------- 372

  Fly   286 LVAEFKKD---SGIDIRKDNIAMQRLKEAAEKAKCELSSSQQTDINLPYLTMDAAGPQHMN---- 343
             :|:||:.   :.:|:   .||.:..|..|...:     :...:|:||:..:|....|..:    
  Rat   373 -IAKFKRQRPAAWVDL---TIAFEARKRTAGPHR-----AGALNISLPFSFIDFYRKQRGHNVET 428

  Fly   344 -----------------LKLTRSKLESLVGDLIKRTIQPCQKALSDAEVSKSEIGEVLLVGGMTR 391
                             |:::...:..|....:...||..:..|:..||...::  :.||||...
  Rat   429 ALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEMLLAKPEVQGVKL--LFLVGGFAE 491

  Fly   392 MPKVQSTVQELFGRQPSRSVNPDEAVAVGAAV-QGGVLAGDVTDVLLLDVTPLSLGIETLGGVFT 455
            ...:|..|||..|.:..|.|.|.:   ||..: :|.||.|....|:.:..:||:.|:    ||..
  Rat   492 SAVLQHAVQEALGNRGLRVVVPHD---VGLTILKGAVLFGQAPGVVRVRRSPLTYGV----GVLN 549

  Fly   456 RLISRNTTIPTKKSQVFSTASDGQ---TQVEIKVHQGEREMANDNKLLGSFTLVGIPPAPRGVPQ 517
            |.:..:.  |.:|..|    .||:   |.|..:....|:.:|...::..|:.     ||..|  |
  Rat   550 RFVPGHH--PPEKLLV----RDGRRWCTDVFERFVAAEQSVALGEEVRRSYC-----PARPG--Q 601

  Fly   518 IEVVFDI------DANGIVHVSAKDKGTGKEQQIVIQSSGGLSKDEIENMIKKAEEYATADKQKR 576
            ..|:.::      ||..|.     |.|        ::..|.||   :|...:.:.|.......:|
  Rat   602 RRVLINLYCCAAEDARFIT-----DPG--------VRKCGALS---LELEPEGSPENTGTSPSRR 650

  Fly   577 ELIEIVNQGESIVHDTETKM 596
            |:...:..|     |||.|:
  Rat   651 EIRAAMQFG-----DTEIKV 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-5NP_001286414.1 dnaK 51..666 CDD:234715 145/689 (21%)
HSPA9-like_NBD 51..428 CDD:212683 103/510 (20%)
Syntaphilin <566..>642 CDD:291936 8/31 (26%)
Hspa12bNP_001381945.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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