DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-5 and hspa8

DIOPT Version :9

Sequence 1:NP_001286414.1 Gene:Hsc70-5 / 36583 FlyBaseID:FBgn0001220 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_002937574.2 Gene:hspa8 / 100496320 XenbaseID:XB-GENE-955426 Length:646 Species:Xenopus tropicalis


Alignment Length:652 Identity:321/652 - (49%)
Similarity:433/652 - (66%) Gaps:29/652 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KGAVIGIDLGTTNSCLAVMEGKQAKVIENAEGARTTPSHVAFTKDGERLVGMPAKRQAVTNSANT 115
            ||..:|||||||.||:.|.:..:.::|.|.:|.|||||:|||| |.|||:|..||.|...|..||
 Frog     3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNT 66

  Fly   116 FYATKRLIGRRFDDPEVKKDITNLSYKVVKASNGDAWVS---STDGKVYSPSQIGAFILMKMKET 177
            .:..||||||||:|..|:.|:.:..:.|: :.:|...|.   ..:.|.:.|.:|.:.:|:||||.
 Frog    67 VFDAKRLIGRRFEDAVVQSDMKHWPFNVI-SDSGRPKVQVEYKAETKSFYPEEISSMVLVKMKEI 130

  Fly   178 AEAYLNTPVKNAVVTVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGMDKT--EDKII 240
            |||||...|.|||:||||||||||||||||||.|:||||||:||||||||:|||:||.  .::.:
 Frog   131 AEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKVGAERNV 195

  Fly   241 AVYDLGGGTFDISILEIQKGVFEVKSTNGDTLLGGEDFDNHIVNFLVAEFKKDSGIDIRKDNIAM 305
            .::||||||||:|||.|:.|:||||||.|||.||||||||.:||..|||||:....||..:..|:
 Frog   196 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVAEFKRKHKKDIIDNKRAV 260

  Fly   306 QRLKEAAEKAKCELSSSQQTDINLP--YLTMDAAGPQHMNLKLTRSKLESLVGDLIKRTIQPCQK 368
            :||:.|.|:||..||||.|..|.:.  |..:|      ....:||::.|.|..||.:.|:.|.:|
 Frog   261 RRLRTACERAKRTLSSSTQASIEIDSLYEGID------FYTSITRARFEELNADLFRGTLDPVEK 319

  Fly   369 ALSDAEVSKSEIGEVLLVGGMTRMPKVQSTVQELF-GRQPSRSVNPDEAVAVGAAVQGGVLAGD- 431
            ||.||::.||:|.:::||||.||:||:|..:|:.| |::.::|:|||||||.|||||..:|:|| 
 Frog   320 ALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDK 384

  Fly   432 ---VTDVLLLDVTPLSLGIETLGGVFTRLISRNTTIPTKKSQVFSTASDGQTQVEIKVHQGEREM 493
               |.|:||||||||||||||.|||.|.||.||||||||::|.|:|.||.|..|.|:|::|||.|
 Frog   385 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAM 449

  Fly   494 ANDNKLLGSFTLVGIPPAPRGVPQIEVVFDIDANGIVHVSAKDKGTGKEQQIVI-QSSGGLSKDE 557
            ..||.|||.|.|.||||||||||||||.||||||||::|||.||.||||.:|.| ...|.|||::
 Frog   450 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514

  Fly   558 IENMIKKAEEYATADKQKRELIEIVNQGESIVHDTETKMEE--FKSQLPAEECEKLKKEIADLRT 620
            ||.|:::||:|...|:::|:.:...|..||...:.:..:|:  .|.::..|:.:|:..:..::.:
 Frog   515 IERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLKGKISDEDKQKILDKCNEVIS 579

  Fly   621 LLANKETADLEEVRKATSSLQQSS----LKLFELAYKKMSAERESNAGAGSSDSSSSSDTSGEAK 681
            .|...:||:.||.......|::..    .||::.|............|||.:.|..:|  ||...
 Frog   580 WLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGAGGAPSGGAS--SGPTI 642

  Fly   682 KE 683
            :|
 Frog   643 EE 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-5NP_001286414.1 dnaK 51..666 CDD:234715 314/633 (50%)
HSPA9-like_NBD 51..428 CDD:212683 199/384 (52%)
Syntaphilin <566..>642 CDD:291936 17/77 (22%)
hspa8XP_002937574.2 PTZ00009 1..613 CDD:240227 312/617 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.