DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-5 and rlf

DIOPT Version :9

Sequence 1:NP_001286414.1 Gene:Hsc70-5 / 36583 FlyBaseID:FBgn0001220 Length:686 Species:Drosophila melanogaster
Sequence 2:XP_031751490.1 Gene:rlf / 100126061 XenbaseID:XB-GENE-977946 Length:1863 Species:Xenopus tropicalis


Alignment Length:473 Identity:88/473 - (18%)
Similarity:167/473 - (35%) Gaps:127/473 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 HIVNFLVAEFKKDSGIDIRKDNIAMQRLKEAAEKAKCELSSSQQTDINLPYLTMDAAGPQHMNLK 345
            |:.:.:......::|.|:..:....|..:..:     .|::...|..||..|..::...|..|: 
 Frog   876 HLEHIVTHTISSNNGKDVINEITCKQENQHLS-----SLNNQAYTLSNLDKLCGNSPMLQDTNI- 934

  Fly   346 LTRSKLESLVGDLIKRTI-------QPCQKALSDAEVSKSEIGEVLLVGGMTRMPKVQSTVQELF 403
            :...|:.:..||:..:.|       .||:...:..:..|:       .||:....|:.:||:...
 Frog   935 VPEKKIPTEPGDVSCKQIHFNASSHNPCEHLHTLTDCLKN-------AGGLHCTCKIANTVKVSL 992

  Fly   404 GRQPSRSVNP---DEAVAVGAAV-----QGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLISR 460
            .|     :||   .:::|....|     :....||:.|     ..|||....|.|..|       
 Frog   993 QR-----INPLQFSQSLAGHNTVNITDKKHNESAGEDT-----PKTPLLPNTEQLNCV------- 1040

  Fly   461 NTTIPTKKSQVFSTASD-GQTQVEIKVHQGEREMANDNKLLGSFTLVGIPPAPRGVPQIEVVFDI 524
            |..:|:  |....:|.| |:|.:....|:...| ...|:||.|...:.:.               
 Frog  1041 NKCVPS--SDKTGSAEDCGETHLSSVCHRSTCE-NTINELLTSLKHLNLK--------------- 1087

  Fly   525 DANGIVHVS-AKDKGTGKEQQI---VIQSSGGLSKDEIENMIKKAEEYATADKQKRELIEI---- 581
            ::|..:..| |:|........|   |.::|..|.::::.:      :|.|....|..|.|:    
 Frog  1088 NSNSCITTSGAQDSEANASSSIDCAVPKNSLPLKQEKVHS------QYLTQLASKPYLCELKGCK 1146

  Fly   582 ---VNQGESIVH---------DTETKMEEFKSQLPAEECEKLKKEIADLRTLL---------ANK 625
               ..:...:||         :...|::.|:::....:|. :.:.....||||         .:|
 Frog  1147 FAFATKDALLVHYVKKHHYTRERTLKLQIFQNKYTPFQCH-ICQTAFSRRTLLRIHYKKVHHLSK 1210

  Fly   626 ETADLEEVRKATSSLQ-------------------------QSSLKLF--ELAYKKMSAERESNA 663
            |.|.....|:...::|                         :|.::.|  |.....:|.|.::..
 Frog  1211 ERATCRRGRRKLENIQTHINERHNNYIQFQANEANTSTHDSKSLIQDFNNETFTDSLSDETDAGN 1275

  Fly   664 GAGSSDSSSSSDTSGEAK 681
            ..|:|.|.|.:...||.:
 Frog  1276 ENGTSGSHSDNFKGGEGR 1293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-5NP_001286414.1 dnaK 51..666 CDD:234715 82/456 (18%)
HSPA9-like_NBD 51..428 CDD:212683 28/161 (17%)
Syntaphilin <566..>642 CDD:291936 19/125 (15%)
rlfXP_031751490.1 COG5236 <731..>926 CDD:227561 9/54 (17%)
C2H2 Zn finger 731..755 CDD:275368
C2H2 Zn finger 774..794 CDD:275368
C2H2 Zn finger 802..824 CDD:275368
C2H2 Zn finger 831..853 CDD:275368
SFP1 <1136..1207 CDD:227516 12/71 (17%)
C2H2 Zn finger 1140..1163 CDD:275368 3/22 (14%)
C2H2 Zn finger 1185..1203 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165171510
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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