DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and ABCI13

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_564850.1 Gene:ABCI13 / 842852 AraportID:AT1G65410 Length:345 Species:Arabidopsis thaliana


Alignment Length:260 Identity:81/260 - (31%)
Similarity:133/260 - (51%) Gaps:48/260 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 NEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGN 489
            |:....||.::|   |.:..|..||..::.||..|:.|.::||||.||||.::::.....|..|.
plant    79 NDSDVLIECRDV---YKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGE 140

  Fly   490 LLFNGTN----LKDLDINWLRSRIGVVGQEPILF-ATSIYENI---RYGREDATREEIEAAAAAA 546
            :...|..    :.|.:|:.|  |||:|.|...|| :.|:.||:   .|.|...:..:|.......
plant   141 VYIRGKKRAGLISDEEISGL--RIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQT 203

  Fly   547 NAAIFIK----KLPKGYDTLVGERGAQLSGGQKQRIAIARALIRD-------PEILLLDEATSAL 600
            .||:.:|    :||           ::||||.|:|:|:||:||.|       ||:||.||.|:.|
plant   204 LAAVGLKGVENRLP-----------SELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGL 257

  Fly   601 DTASEAKVQAALEKV------SAGR-----TTIIVAHRLSTVRRA-DRIVVINKGEVVESG-THQ 652
            |..:...|:..:..|      :.|:     :.::|.|:.||::|| ||::.:.:|::|..| ||:
plant   258 DPIASTVVEDLIRSVHMTDEDAVGKPGKIASYLVVTHQHSTIQRAVDRLLFLYEGKIVWQGMTHE 322

  Fly   653  652
            plant   323  322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 81/260 (31%)
ABCI13NP_564850.1 ABC_Org_Solvent_Resistant 85..334 CDD:213228 80/254 (31%)

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