DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and ABCB9

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_001328203.1 Gene:ABCB9 / 827530 AraportID:AT4G18050 Length:1246 Species:Arabidopsis thaliana


Alignment Length:1315 Identity:496/1315 - (37%)
Similarity:745/1315 - (56%) Gaps:117/1315 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KSKKKSKHDESDASDEEDGSQYHEDVKQVSYFQLFRYATKKDRALYVIGLLSAVATGLTTPANSL 107
            |.:::.:..|..:|.:.||..     ::||:|:||.:|.|.|..|..:|.::|...|||.|..:|
plant     3 KEEERKERMEEKSSKKNDGGN-----QKVSFFKLFSFADKTDVVLMTVGTIAAAGNGLTQPFMTL 62

  Fly   108 IFGNLANDMIDLGGLLESGKSYRADDAISTL----LLDKVRQFSLQNTYIGIIMLVCSYLSITCF 168
            |||.|.|                   |..|.    ::.:|.:.:::..|:.:...|.::|.::|:
plant    63 IFGQLIN-------------------AFGTTDPDHMVREVWKVAVKFIYLAVYSCVVAFLQVSCW 108

  Fly   169 NYAAHSQILTIRSKFFRSILHQDMKWYDF-NQSGEVASRMNEDLSKMEDGLAEKVVMFVHYLVAF 232
            ......|..|||..:.::||.||:.::|. ..:|||..||:.|...::|.:.|||..|...|..|
plant   109 MVTGERQSATIRGLYLKTILRQDIGYFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFTQLLCTF 173

  Fly   233 VGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVATSRLAKKEVTMYAGAAVVAEGALSGIRTVK 297
            :|...:||.||..|:.|..:.:||..||...:::..|::|.:....||.|..|.|..:..||||.
plant   174 LGGFAIAFYKGPLLAGVLCSCIPLIVIAGAAMSLIMSKMAGRGQVAYAEAGNVVEQTVGAIRTVV 238

  Fly   298 AFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWFFIYASYALAFWYGVGLVIKGYHEPAY 362
            ||.||.:....|:.::..|....:::.:.||.|.|.:...|:.||.||.|||..|:::       
plant   239 AFTGEKQATEKYESKLEIAYKTVVQQGLISGFGLGTMLAVIFCSYGLAVWYGAKLIME------- 296

  Fly   363 ENYDAGTMITVFFSVMMGSMNIGMAAPYIEAFGIAKGACAKVFHIIEQIPEINPIDGEGKKLNEP 427
            :.|:.|.:|.|.|:|:.|.|::|..:|.:.||...:.|..|:|..|::.|:|:..|..|..|.:.
plant   297 KGYNGGQVINVIFAVLTGGMSLGQTSPSLNAFAAGRAAAFKMFETIKRSPKIDAYDMSGSVLEDI 361

  Fly   428 LTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLF 492
            ...||.|:|.|:||.||:|.|....:|.:..|:||||||.||.||||.|.|::|||||::|.:|.
plant   362 RGDIELKDVYFRYPARPDVQIFAGFSLFVPNGKTVALVGQSGSGKSTVISLIERFYDPESGQVLI 426

  Fly   493 NGTNLKDLDINWLRSRIGVVGQEPILFATSIYENIRYGREDATREEIEAAAAAANAAIFIKKLPK 557
            :..:||.|.:.|:||:||:|.|||:||||:|.|||.||:||||.:||..|...||||.||.|||:
plant   427 DNIDLKKLQLKWIRSKIGLVSQEPVLFATTIKENIAYGKEDATDQEIRTAIELANAAKFIDKLPQ 491

  Fly   558 GYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATSALDTASEAKVQAALEKVSAGRTTI 622
            |.||:|||.|.|:|||||||:|||||::::|:||||||||||||..||..||.||..:.:.|||:
plant   492 GLDTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESERIVQDALVNLMSNRTTV 556

  Fly   623 IVAHRLSTVRRADRIVVINKGEVVESGTHQELM-ELKDHYFNLVTTQLGEDDGSVLSPTGDIYKN 686
            :|||||:|:|.||.|.|:::|::||.|||.|:: :.:..|..||..|.|..:.:..|...:  .:
plant   557 VVAHRLTTIRTADVIAVVHQGKIVEKGTHDEMIQDPEGAYSQLVRLQEGSKEEATESERPE--TS 619

  Fly   687 FDIKDEDE------------------------------EEIKVLSEDEDEDVMVTDEKNKKKKKK 721
            .|::....                              ..:.|...||.||    :|.|.:.||.
plant   620 LDVERSGSLRLSSAMRRSVSRNSSSSRHSFSLASNMFFPGVNVNQTDEMED----EENNVRHKKV 680

  Fly   722 KVKDPNEVKPMLEVMKMNKPEWLQIAVGCISSVIMGCAMPIFAVLFGSILQILSVKDNDQYVREN 786
            .:|         .:..:||||...:.:|.|::::.|...|||.:|..|.:.:.  .:..:.::::
plant   681 SLK---------RLAHLNKPEIPVLVLGSIAAMVHGTVFPIFGLLLSSSINMF--YEPAKILKKD 734

  Fly   787 SNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLTERLRGLMFEAMLRQEVAWFDDKANGTGSLCA 851
            |:.::|.::..|:...:...:|.|||||||.:|.:|:|.:.|:.::.||::||||.||...    
plant   735 SHFWALIYIALGLTNFVMIPVQNYFFGIAGGKLIKRIRSMCFDKVVHQEISWFDDTANSRS---- 795

  Fly   852 RLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEWSLGLVALAFTPFILIAFYMQRTLMAK 916
             |.|||.|:          |||:|:|:..|:.::....|.|.|:.||.:|||:|..|.|...:..
plant   796 -LVGDALAL----------IVQNIATVTTGLIIAFTANWILALIVLALSPFIVIQGYAQTKFLTG 849

  Fly   917 ENMGSAKTMENCTKLAVEVVSNIRTVASLGREE----MFHQNYIGMLIPAVEISKRNTHFRGLVY 977
            .:..:....|..:::|.:.||:||||||...||    ::.|...|        .|:|....||:.
plant   850 FSADAKAMYEEASQVANDAVSSIRTVASFCAEEKVMDLYQQKCDG--------PKKNGVRLGLLS 906

  Fly   978 GLARSL-MFFAY---AACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANALAFAPNMQKGVS 1038
            |..... .||.|   ..|...|...:......||:||||..||.:....::...|.||:..|...
plant   907 GAGFGFSFFFLYCINCVCFVSGAGLIQIGKATFGEVFKVFFALTIMAIGVSQTSAMAPDSNKAKD 971

  Fly  1039 AAKTIFTFLRRQPSIVDRPGVSRDPWHSEGYVRFDKVKFSYPTRSEIQVLKGLELAVSKGQKIAL 1103
            :|.:||..|...|.|...........:..|.:.|..|.|.||.|.::|:.:.|.|.:..|:.:||
plant   972 SAASIFDILDSTPKIDSSSDEGTTLQNVNGDIEFRHVSFRYPMRPDVQIFRDLCLTIPSGKTVAL 1036

  Fly  1104 VGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPILFDRTIRENISY 1168
            ||.||.||||.|.:|:|||:.|.|..|||:.:::...::.||.|:|:||||||||:.|||.||:|
plant  1037 VGESGSGKSTVISMIERFYNPDSGKILIDQVEIQTFKLSWLRQQMGLVSQEPILFNETIRSNIAY 1101

  Fly  1169 GDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARALIRNPKIML 1233
            |... ..|::|||:|.|.:|.|.||::||.||||.:||:|.|||||||||||||||::::|||:|
plant  1102 GKTG-GATEEEIIAAAKAANAHNFISSLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILL 1165

  Fly  1234 LDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEAGDHKQLL-A 1297
            |||||||||||||:|||||||.....|||:.:||||:|:.::|||.|.:||::.|.|.|:.|: .
plant  1166 LDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHETLMKI 1230

  Fly  1298 NRGLYYTLYKLQSGA 1312
            :.|.|.:|..|...|
plant  1231 SGGAYASLVTLHMSA 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 489/1283 (38%)
ABC_membrane 92..382 CDD:279056 88/294 (30%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 135/237 (57%)
ABC_membrane 750..1020 CDD:279056 84/277 (30%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 128/239 (54%)
ABCB9NP_001328203.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 198 1.000 Domainoid score I882
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55496
Inparanoid 1 1.050 876 1.000 Inparanoid score I60
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

Return to query results.
Submit another query.