DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and ABCB21

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_001327192.1 Gene:ABCB21 / 825388 AraportID:AT3G62150 Length:1296 Species:Arabidopsis thaliana


Alignment Length:1347 Identity:509/1347 - (37%)
Similarity:782/1347 - (58%) Gaps:94/1347 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKNGDVVKDDVNSRSQYKTNIVLGAKLEDSDRDRKSFEPNKSKKKSKHDESDASDEEDGSQYHED 67
            :::.:.:|.|..:|:..:|:   .:|:.:.|......|.:..::|.|.:::  ..|||     |.
plant     5 IESEEGLKVDSPNRADAETS---NSKIHEEDEKELKTESDLKEEKKKTEKN--KQEED-----EK 59

  Fly    68 VKQVSYFQLFRYATKKDRALYVIGLLSAVATGLTTPANSLIFGNLANDMIDLGGLLESGKSYRAD 132
            .|.|.:.:||.:|...|..|.::|.:.||..||..|..:::||    |:||:     .|::..:.
plant    60 TKTVPFHKLFAFADSFDIILMILGTIGAVGNGLGFPIMTILFG----DVIDV-----FGQNQNSS 115

  Fly   133 DAISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDF 197
            |     :.||:.:.:|:..|:|:..||.:.|.::.:..:...|...|||.:.::||.||:.::|.
plant   116 D-----VSDKIAKVALKFVYLGLGTLVAALLQVSGWMISGERQAGRIRSLYLQTILRQDIAFFDV 175

  Fly   198 -NQSGEVASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAM 261
             ..:|||..||:.|...::|.:.|||...:..:..|:|..|:||.:||.|:||.::|:||..::.
plant   176 ETNTGEVVGRMSGDTVLIQDAMGEKVGKAIQLVSTFIGGFVIAFTEGWLLTLVMVSSIPLLVMSG 240

  Fly   262 GLVAVATSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMF 326
            ..:|:..|::|.:..|.||.||||.|..:..||||.:|.||.:.::.|.:.:|:|....:.....
plant   241 AALAIVISKMASRGQTSYAKAAVVVEQTVGSIRTVASFTGEKQAISNYNKHLVSAYRAGVFEGAS 305

  Fly   327 SGIGFGLLWFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPYI 391
            :|:|.|.|...|:.:||||.|||..::::       :.|..|.::.:.|:|:.|||::|.|:|.:
plant   306 TGLGLGTLNIVIFCTYALAVWYGGKMILE-------KGYTGGQVLIIIFAVLTGSMSLGQASPCL 363

  Fly   392 EAFGIAKGACAKVFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKI 456
            .||...:.|..|:|..|::.|||:..|..||.|::....||...|.|.||.|||..|....:|.|
plant   364 SAFAAGQAAAYKMFEAIKRKPEIDASDTTGKVLDDIRGDIELNNVNFSYPARPEEQIFRGFSLSI 428

  Fly   457 HRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFAT 521
            ..|.||||||.||.||||.:.|::||||||:|.:..:|.|||:..:.|:||:||:|.|||:||.:
plant   429 SSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEVRIDGINLKEFQLKWIRSKIGLVSQEPVLFTS 493

  Fly   522 SIYENIRYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIR 586
            ||.|||.||:|:||.|||..|...|||:.||.|||:|.||:|||.|.|||||||||||:|||:::
plant   494 SIKENIAYGKENATVEEIRKATELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILK 558

  Fly   587 DPEILLLDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTH 651
            ||.||||||||||||..||..||.||:::...|||::|||||||||.||.|.||::|::||.|:|
plant   559 DPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSH 623

  Fly   652 QELM-ELKDHYFNLVTTQLGEDDGSVLSPTGDIYKNFDIKDEDEEEIKV---------------- 699
            .||: :.:..|..|:  :|.||.......|            ||:::.:                
plant   624 SELLRDPEGAYSQLI--RLQEDTKQTEDST------------DEQKLSMESMKRSSLRKSSLSRS 674

  Fly   700 LSEDEDEDVMV-----TDEKNKKKKKKKVKDPNEVK----PMLEVMKMNKPEWLQIAVGCISSVI 755
            ||:......|.     .|..|:...:|.:|....:|    ....|..:||||...:.:|.|::|:
plant   675 LSKRSSSFSMFGFPAGIDTNNEAIPEKDIKVSTPIKEKKVSFFRVAALNKPEIPMLILGSIAAVL 739

  Fly   756 MGCAMPIFAVLFGSILQILSVKDNDQYVRENSNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLT 820
            .|..:|||.:|..|:::.. .|..:| ::.::..:::.|::.|:...:....|..||.|||.:|.
plant   740 NGVILPIFGILISSVIKAF-FKPPEQ-LKSDTRFWAIIFMLLGVASMVVFPAQTIFFSIAGCKLV 802

  Fly   821 ERLRGLMFEAMLRQEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALS 885
            :|:|.:.||.::|.||.|||:..|.:|::.||||.|||.|:|..|..:...||:::::..|:.::
plant   803 QRIRSMCFEKVVRMEVGWFDETENSSGAIGARLSADAATVRGLVGDALAQTVQNLASVTAGLVIA 867

  Fly   886 MYYEWSLGLVALAFTPFILIAFYMQRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEM 950
            ....|.|..:.||..|.|.:..|:....|...:..:.:..|..:::|.:.|.:||||||...||.
plant   868 FVASWQLAFIVLAMLPLIGLNGYIYMKFMVGFSADAKRMYEEASQVANDAVGSIRTVASFCAEEK 932

  Fly   951 FHQNYIGMLIPAVEISKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQA 1015
            ..:.|.......:....|.....|:.:|::..::|.:|||..|.|...|......|..||:|..|
plant   933 VMKMYKKKCEGPMRTGIRQGIVSGIGFGVSFFVLFSSYAASFYAGARLVDDGKTTFDSVFRVFFA 997

  Fly  1016 LIMGTASIANALAFAPNMQKGVSAAKTIFTFLRRQPSIVDRPGVSRDPWHSEGYVRFDKVK---- 1076
            |.|...:|:.:.:.:|:..|..:||.:||..:.|:..|        ||....|.| .|.||    
plant   998 LTMAAVAISQSSSLSPDSSKASNAAASIFAVIDRESKI--------DPSDESGRV-LDNVKGDIE 1053

  Fly  1077 -----FSYPTRSEIQVLKGLELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDV 1136
                 |.||:|.::|:.:.|.|::..|:.|||||.||.||||.|.|:|||||.|.|...:|..::
plant  1054 LRHISFKYPSRPDVQIFQDLCLSIRAGKTIALVGESGSGKSTVIALLQRFYDPDSGQITLDGVEI 1118

  Fly  1137 RNVSMTNLRNQLGIVSQEPILFDRTIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPLGYD 1201
            :.:.:..||.|.|:|||||:||:.|||.||:||... :.|:.||:||.:.||.|.||:.|..|||
plant  1119 KTLQLKWLRQQTGLVSQEPVLFNETIRANIAYGKGG-DATETEIVSAAELSNAHGFISGLQQGYD 1182

  Fly  1202 TRMGEKGAQLSGGQKQRIAIARALIRNPKIMLLDEATSALDAESEKVVQDALDAASEGRTTISIA 1266
            |.:||:|.|||||||||:|||||::::||::||||||||||||||:|||||||.....|||:.:|
plant  1183 TMVGERGVQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTVVVA 1247

  Fly  1267 HRLSTVVHSDVIFVFENGLVCEAGDHKQLL-ANRGLYYTLYKLQSGA 1312
            |||||:.::|||.|.:||::.|.|.|:.|: ...|:|.:|.:|...|
plant  1248 HRLSTIKNADVIAVVKNGVIVEKGKHETLINIKDGVYASLVQLHLSA 1294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 494/1275 (39%)
ABC_membrane 92..382 CDD:279056 90/290 (31%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 137/237 (58%)
ABC_membrane 750..1020 CDD:279056 81/269 (30%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 128/248 (52%)
ABCB21NP_001327192.1 PTZ00265 16..1290 CDD:240339 505/1330 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 198 1.000 Domainoid score I882
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55496
Inparanoid 1 1.050 876 1.000 Inparanoid score I60
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

Return to query results.
Submit another query.