DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and ABCB19

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_189528.1 Gene:ABCB19 / 822519 AraportID:AT3G28860 Length:1252 Species:Arabidopsis thaliana


Alignment Length:1318 Identity:488/1318 - (37%)
Similarity:747/1318 - (56%) Gaps:108/1318 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EDSDRDRKSFEPNKSKKKSKHDESDASDEEDGSQYHEDVKQVSYFQLFRYATKKDRALYVIGLLS 94
            |.:..|.|:......|||.                    :.:.:|:||.:|.|.|..|..:|.|.
plant     3 ETNTTDAKTVPAEAEKKKE--------------------QSLPFFKLFSFADKFDYLLMFVGSLG 47

  Fly    95 AVATGLTTPANSLIFGNLAN----DMIDLGGLLESGKSYRADDAISTLLLDKVRQFSLQNTYIGI 155
            |:..|.:.|...|:||.:.|    :.:||..::.                 :|.::||...|:|:
plant    48 AIVHGSSMPVFFLLFGQMVNGFGKNQMDLHQMVH-----------------EVSRYSLYFVYLGL 95

  Fly   156 IMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFN-QSGEVASRMNEDLSKMEDGLA 219
            ::...||..|.|:.|:...|:..:|.|:..::|.||:.::|.: ::|::...::.|...::|.::
plant    96 VVCFSSYAEIACWMYSGERQVAALRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAIS 160

  Fly   220 EKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVATSRLAKKEVTMYAGAAV 284
            |||..|:|||..|:..||:.||..|:|:|:.:..:|....|.||.|...:.:..|....||.|.|
plant   161 EKVGNFIHYLSTFLAGLVVGFVSAWKLALLSVAVIPGIAFAGGLYAYTLTGITSKSRESYANAGV 225

  Fly   285 VAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWFFIYASYALAFWYG 349
            :||.|::.:|||.::.||:|.:.||.:.:.....|..|..|..|:|.|..:.....|:||.||| 
plant   226 IAEQAIAQVRTVYSYVGESKALNAYSDAIQYTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWY- 289

  Fly   350 VGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPYIEAFGIAKGACAKVFHIIEQIPEI 414
            .|:.|:.      ...|.|...|..||.::|.|::|.:...:.||...|.|..|:..||.|.|.|
plant   290 AGVFIRN------GQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIINQRPTI 348

  Fly   415 --NPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQ 477
              :|:|  ||.|::....||||:|.|.||:||:|.|....|:....|:|||:||.||.||||.:.
plant   349 IQDPLD--GKCLDQVHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGSGSGKSTVVS 411

  Fly   478 LVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENIRYGREDATREEIEAA 542
            |::|||||.:|.:|.:|..:|.|.:.:||.:||:|.|||.||||:|.|||.||:.|||..|:|||
plant   412 LIERFYDPNSGQILLDGVEIKTLQLKFLREQIGLVNQEPALFATTILENILYGKPDATMVEVEAA 476

  Fly   543 AAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATSALDTASEAK 607
            |:||||..||..|||||||.|||||.|||||||||||||||:::||:||||||||||||.:||:.
plant   477 ASAANAHSFITLLPKGYDTQVGERGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDASSESI 541

  Fly   608 VQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMELKDHYFNLVTTQ--LG 670
            ||.||::|..||||::|||||.|:|..|.|.||.:|:|||:|||:||:.....|.:|:..|  :|
plant   542 VQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAKSGAYASLIRFQEMVG 606

  Fly   671 EDDGS-------------------VLSPTGDIYKN--FDIKDEDEEEIKVLSEDEDEDVMVTDEK 714
            ..|.|                   .||......:|  :......:..|:::|..|      ||.|
plant   607 TRDFSNPSTRRTRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMISNAE------TDRK 665

  Fly   715 NKKKKKKKVKDPNEVKPMLEVMKMNKPEWLQIAVGCISSVIMGCAMPIFAVLFGSILQILSVKDN 779
            .:..:..          ...::|:|.|||....:|.:.|::.|...|.||::..:::::....|.
plant   666 TRAPENY----------FYRLLKLNSPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYTDY 720

  Fly   780 DQYVRENSNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLTERLRGLMFEAMLRQEVAWFDDKAN 844
            |...|: :.:|...::.||:....|..:|.|||.|.||.||.|:|.:|..|:||.||.|||:..:
plant   721 DSMERK-TKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLSAILRNEVGWFDEDEH 784

  Fly   845 GTGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEWSLGLVALAFTPFILIAFYM 909
            .:..:.|||:.|||.|:.|..:||..|:|::::|.....::...||.:.|:.|...|.:::|.:.
plant   785 NSSLIAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFA 849

  Fly   910 QRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQNYIGMLIPAVEISKRNTHFR- 973
            |:..:......:||.....:.:|.|.||||||||:...:    ...:.:....:.:.::.:.:| 
plant   850 QQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQ----SKILSLFCHELRVPQKRSLYRS 910

  Fly   974 ---GLVYGLARSLMFFAYAACMYYGTWCVIHRGI-LFGDVFKVSQALIMGTASIANALAFAPNMQ 1034
               |.::||::..::.:.|..::||.. ::.:|: .|..|.||...|::...|:|..::.||.:.
plant   911 QTSGFLFGLSQLALYGSEALILWYGAH-LVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEII 974

  Fly  1035 KGVSAAKTIFTFLRRQPSIVDRPGVSRDPWHS-EGYVRFDKVKFSYPTRSEIQVLKGLELAVSKG 1098
            :|..|..::|:.|.||..| |......||..: .|.:.|..|.|:||:|.::.|.:...|.:..|
plant   975 RGGEAVGSVFSVLDRQTRI-DPDDADADPVETIRGDIEFRHVDFAYPSRPDVMVFRDFNLRIRAG 1038

  Fly  1099 QKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPILFDRTIR 1163
            ...||||.||.|||:.|.:|:||||...|..:||..|:|.:::.:||.::|:|.|||.||..||.
plant  1039 HSQALVGASGSGKSSVIAMIERFYDPLAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAATIF 1103

  Fly  1164 ENISYGDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARALIRN 1228
            :||:||.:  ..|:.|:|.|.:.:|.|.||:.||.||.|.:||:|.|||||||||||||||:::|
plant  1104 DNIAYGKD--GATESEVIDAARAANAHGFISGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKN 1166

  Fly  1229 PKIMLLDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEAGDHK 1293
            |.::||||||||||||||.|:|:||:....||||:.:||||||:...|.|.|.::|.:.|.|.|.
plant  1167 PTVLLLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGSHS 1231

  Fly  1294 QLLAN-RGLYYTLYKLQS 1310
            :|::. .|.|..|.:||:
plant  1232 ELVSRPEGAYSRLLQLQT 1249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 480/1275 (38%)
ABCB19NP_189528.1 MdlB 26..604 CDD:440747 254/603 (42%)
MdlB 666..1248 CDD:440747 214/600 (36%)

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