DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and ABCB15

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_189475.1 Gene:ABCB15 / 822463 AraportID:AT3G28345 Length:1240 Species:Arabidopsis thaliana


Alignment Length:1287 Identity:477/1287 - (37%)
Similarity:712/1287 - (55%) Gaps:124/1287 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LFRYATKKDRALYVIGLLSAVATGLTTPANSLIFGNLANDMIDLGGLLESGKSYRADDAISTLLL 140
            :|.:|...|..|..:||:.||..|.|||...||...|.|::        .|.|:..|     ..:
plant    23 IFMHADGVDWLLMGLGLIGAVGDGFTTPLVLLITSKLMNNI--------GGSSFNTD-----TFM 74

  Fly   141 DKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFN--QSGEV 203
            ..:.:.|:...|:.....|..:|...|:......|...:|.|:.|::|.||:.::|.:  .:.:|
plant    75 QSISKNSVALLYVACGSWVVCFLEGYCWTRTGERQTARMREKYLRAVLRQDVGYFDLHVTSTSDV 139

  Fly   204 ASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFI---AMGLVA 265
            .:.::.|...::|.|:||:..|:.....||||.::.|:..|:|::|.|..:.|..|   ..|...
plant   140 ITSVSSDSFVIQDVLSEKLPNFLMSASTFVGSYIVGFILLWRLAIVGLPFIVLLVIPGLMYGRAL 204

  Fly   266 VATSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIG 330
            ::.||..::|   |..|..|||.|:|.:|||.||.||.|.::.:...:..:..|.||:.:..||.
plant   205 ISISRKIREE---YNEAGFVAEQAISSVRTVYAFSGERKTISKFSTALQGSVKLGIKQGLAKGIT 266

  Fly   331 FG------LLWFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAP 389
            .|      .:|.|:       .|||..:|:       |.....||:..|..::.:|.:::|....
plant   267 IGSNGITFAMWGFM-------SWYGSRMVM-------YHGAQGGTVFAVAAAIAIGGVSLGGGLS 317

  Fly   390 YIEAFGIAKGACAKVFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNL 454
            .::.|..|.....::..:|.::|:|:..:.:|.||.:....:|||.|:|.||:|.|.||.:...|
plant   318 NLKYFFEAASVGERIMEVINRVPKIDSDNPDGHKLEKIRGEVEFKNVKFVYPSRLETSIFDDFCL 382

  Fly   455 KIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILF 519
            ::..|:||||||.||.||||.|.|:||||||.||.:|.:|.::..|.:.||||::|:|.|||.||
plant   383 RVPSGKTVALVGGSGSGKSTVISLLQRFYDPLAGEILIDGVSIDKLQVKWLRSQMGLVSQEPALF 447

  Fly   520 ATSIYENIRYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARAL 584
            ||:|.|||.:|:|||:.:::..||.|:||..||.:||.||:|.|||||.|:|||||||||||||:
plant   448 ATTIKENILFGKEDASMDDVVEAAKASNAHNFISQLPNGYETQVGERGVQMSGGQKQRIAIARAI 512

  Fly   585 IRDPEILLLDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESG 649
            |:.|.||||||||||||:.||..||.|||..|.|||||::||||||:|.||.|.|:..|.:||:|
plant   513 IKSPTILLLDEATSALDSESERVVQEALENASIGRTTILIAHRLSTIRNADVISVVKNGHIVETG 577

  Fly   650 THQELME-LKDHYFNLV-TTQLGEDD-------GSVLSPTGDIYKNFDIKDEDEEEIKVLSEDED 705
            :|.|||| :...|..|| ..|:.:.|       |.:..|:.||        .:...:..||    
plant   578 SHDELMENIDGQYSTLVHLQQIEKQDINVSVKIGPISDPSKDI--------RNSSRVSTLS---- 630

  Fly   706 EDVMVTDEKNKKKKKKKVKDPNEVKPMLE-----------VMKMNKPEWLQIAVGCISSVIMGCA 759
                      :......|..|:.:|.:.|           ::.||.|||.|...||||:.:.|..
plant   631 ----------RSSSANSVTGPSTIKNLSEDNKPQLPSFKRLLAMNLPEWKQALYGCISATLFGAI 685

  Fly   760 MPIFAVLFGSILQILSVKDNDQYVRENSNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLTERLR 824
            .|.:|...||::.:..:..:|: ::|.:..|:|.|:...::..:....|.|.|...||.||:|:|
plant   686 QPAYAYSLGSMVSVYFLTSHDE-IKEKTRIYALSFVGLAVLSFLINISQHYNFAYMGEYLTKRIR 749

  Fly   825 GLMFEAMLRQEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYE 889
            ..|...:|..||.|||...|.:|::|:||:.||..|:...|.|:..:||::|.:.:...:.:...
plant   750 ERMLSKVLTFEVGWFDRDENSSGAICSRLAKDANVVRSLVGDRMALVVQTVSAVTIAFTMGLVIA 814

  Fly   890 WSLGLVALAFTPFILIAFYMQRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQN 954
            |.|.||.:|..|.|::.||.:|.|:...:..:.|..:..:|||.|.|||:||:.:...:|    .
plant   815 WRLALVMIAVQPVIIVCFYTRRVLLKSMSKKAIKAQDESSKLAAEAVSNVRTITAFSSQE----R 875

  Fly   955 YIGMLIPAVEI----SKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQA 1015
            .:.||..|.|.    |.|.:.|.|....:::||....:|...:||       |.|..|.:..::|
plant   876 IMKMLEKAQESPRRESIRQSWFAGFGLAMSQSLTSCTWALDFWYG-------GRLIQDGYITAKA 933

  Fly  1016 L------IMGTAS-IANALAFAPNMQKGVSAAKTIFTFLRRQPSIVDRPGVSRDPWHSEGY---- 1069
            |      ::.|.. ||:|.:...::.||..|..::|..|.|..||        ||...:||    
plant   934 LFETFMILVSTGRVIADAGSMTTDLAKGSDAVGSVFAVLDRYTSI--------DPEDPDGYETER 990

  Fly  1070 ----VRFDKVKFSYPTRSEIQVLKGLELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATL 1130
                |.|..|.||||||.::.:.|...:.:.:|:..|:|||||.||||.|.||:||||..:|...
plant   991 ITGQVEFLDVDFSYPTRPDVIIFKNFSIKIEEGKSTAIVGPSGSGKSTIIGLIERFYDPLKGIVK 1055

  Fly  1131 IDECDVRNVSMTNLRNQLGIVSQEPILFDRTIRENISYGDNARNVTDQEIISACKKSNIHEFIAN 1195
            ||..|:|:..:.:||..:.:|||||.||..||||||.||..:..:.:.|||.|.|.:|.|:||.:
plant  1056 IDGRDIRSYHLRSLRRHIALVSQEPTLFAGTIRENIIYGGVSDKIDEAEIIEAAKAANAHDFITS 1120

  Fly  1196 LPLGYDTRMGEKGAQLSGGQKQRIAIARALIRNPKIMLLDEATSALDAESEKVVQDALDAASEGR 1260
            |..||||..|::|.|||||||||||||||:::||.::||||||||||::||:||||||:....||
plant  1121 LTEGYDTYCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSERVVQDALERVMVGR 1185

  Fly  1261 TTISIAHRLSTVVHSDVIFVFENGLVCEAGDHKQLLAN--RGLYYTLYKLQS 1310
            |::.|||||||:.:.|.|.|.:.|.:.|.|.|..||:.  .|:|::|..||:
plant  1186 TSVVIAHRLSTIQNCDAIAVLDKGKLVERGTHSSLLSKGPTGIYFSLVSLQT 1237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 475/1283 (37%)
ABC_membrane 92..382 CDD:279056 81/300 (27%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 140/238 (59%)
ABC_membrane 750..1020 CDD:279056 82/279 (29%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 123/240 (51%)
ABCB15NP_189475.1 PTZ00265 34..1235 CDD:240339 472/1272 (37%)
ABC_membrane 39..299 CDD:279056 79/289 (27%)
ABC_MTABC3_MDL1_MDL2 359..597 CDD:213216 140/237 (59%)
ABC_membrane 676..935 CDD:279056 81/270 (30%)
ABC_MTABC3_MDL1_MDL2 995..1236 CDD:213216 123/240 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 145 1.000 Domainoid score I1471
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 876 1.000 Inparanoid score I60
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - mtm951
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.740

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