DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and ABCB6

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_181480.1 Gene:ABCB6 / 818533 AraportID:AT2G39480 Length:1407 Species:Arabidopsis thaliana


Alignment Length:1400 Identity:438/1400 - (31%)
Similarity:691/1400 - (49%) Gaps:190/1400 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SDASDEEDGSQYHE---DVKQVSYFQLFRYATKKDRALYVIGLLSAVATGLTTPANSLIFGNLAN 114
            :.|.|||:..:..|   ....|.:.|||..|.:.|..|.|.|.::|.|.|...    :::.:...
plant    48 AQADDEEEMEEPEEMEPPPAAVPFSQLFACADRFDWVLMVFGSVAAAAHGTAL----IVYLHYFA 108

  Fly   115 DMIDLGGLLESGKSYRADDAISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHSQILTI 179
            .::.:...........:||..:.||     :.||...||...:.:..::.::|:......|...|
plant   109 KIVQVLAFPTDSDHLISDDQFNRLL-----ELSLTIVYIAGGVFISGWIEVSCWILTGERQTAVI 168

  Fly   180 RSKFFRSILHQDMKWYD-FNQSGEVASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKG 243
            |||:.:.:|:|||.::| :..:|::.|::..|:..::..|:|||..::|.:..|:..|::.||..
plant   169 RSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLIIGFVNC 233

  Fly   244 WQLSLVCLTSLPLTFIAMGLVAVATSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAA 308
            |:::|:.|.:.|....|.|:..:...|||:.....||.||.:||.|:|.:||:.||..|.....:
plant   234 WEIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYS 298

  Fly   309 YKERVVAAKILNIKRNMFSGIGFGLLWFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITV 373
            |...:.|.....|..::..|:|.|..:.....|.|:..|.|...||   |..|    :.|.:||.
plant   299 YATSLQATLRYGILISLVQGLGLGFTYGLAICSCAMQLWIGRFFVI---HHRA----NGGEIITA 356

  Fly   374 FFSVMMGSMNIGMAAPYIEAFGIAKGACAKVFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEF 438
            .|:|::..:.:..||....:|...:.|..::|.:|.:  ..:..:.||..|:.....|||:.|.|
plant   357 LFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISR--SSSGTNQEGIILSAVQGNIEFRNVYF 419

  Fly   439 QYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDIN 503
            .|.:|||:.||:...|.:...:.|||||.:|.|||:.|.|::|||||..|.:|.:|.|:|:|.:.
plant   420 SYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE 484

  Fly   504 WLRSRIGVVGQEPILFATSIYENIRYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGA 568
            ||||:||:|.|||.|.:.||.|||.||| |||.::||.||..|:|..||..|.|||:|.||:.|.
plant   485 WLRSQIGLVTQEPALLSLSIRENIAYGR-DATLDQIEEAAKKAHAHTFISSLEKGYETQVGKTGL 548

  Fly   569 QLSGGQKQRIAIARALIRDPEILLLDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRR 633
            .|:..||.:::||||::.||.||||||.|..||..:|..||.||:.:..||:|||:|.|||.:|.
plant   549 TLTEEQKIKLSIARAVLLDPTILLLDEVTGGLDFEAERVVQEALDLLMLGRSTIIIARRLSLIRN 613

  Fly   634 ADRIVVINKGEVVESGTHQELMELKDHYFNLVTTQ------------------------------ 668
            ||.|.|:.:|:::|.|||.||:.|.:.|..|:..:                              
plant   614 ADYIAVMEEGQLLEMGTHDELINLGNLYAELLKCEEATKLPRRMPVRNYNDSAAFQAERDSSAGR 678

  Fly   669 ---------------------------------------------LGEDDGSVLSPTGDIYKNFD 688
                                                         |||:..|:  ..|:  |...
plant   679 GFQEPSSPKMAKSPSLQRGHNVFRSQELCFNSEESPNDHSPAPEKLGENGSSL--DVGE--KEPT 739

  Fly   689 IKDEDEEEIKV--------------LSEDEDED-----VMVTDEKNKKKKK-------------- 720
            ||.:|..|:::              .|...|.:     ::::|.:|::...              
plant   740 IKRQDSFEMRLPELPKIDIQCPQRQKSNGSDPESPISPLLISDPQNERSHSQTFSRPLGHSDDTS 804

  Fly   721 ---KKVKDPNEVKP--MLEVMKMNKPEWLQIAVGCISSVIMGCAMPIFAVLFGSILQILSVKDND 780
               |..||....:|  ...:.:::.||||...:|.|.:.|.|...|:.|.:...::... .....
plant   805 ASVKVAKDGQHKEPPSFWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLLAYVIALVVTTY-YTSKG 868

  Fly   781 QYVRENSNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLTERLRGLMFEAMLRQEVAWFDDKANG 845
            .::||..:::.|.....|||..:|.|||.::|||.||::|||:|.:||.||||.||.|:|::.|.
plant   869 SHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWYDEEENS 933

  Fly   846 TGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEWSLGLVALAFTPFILIAFYMQ 910
            ..:|..||:.||..|:.|...|:...:|....:.:.|.:.:...|.|.|||||..|.:.::...|
plant   934 PDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVAILIGLLLGWRLALVALATLPVLTLSAIAQ 998

  Fly   911 RTLMAKENMGSAKTMENCTKLAVEVVSNIRTVAS-----------------LGREEMFHQNYIGM 958
            :..:|..:.|..:.....:.:..:.|.||.||.:                 :.|:..||    ||
plant   999 KLWLAGFSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLQRILRQSFFH----GM 1059

  Fly   959 LIPAVEISKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQALI------ 1017
            .|             |..:|.::.|:|...|..::|....|..|      ..|:|.||.      
plant  1060 AI-------------GFAFGFSQFLLFACNALLLWYTALSVDRR------YMKLSTALTEYMVFS 1105

  Fly  1018 MGTASIANALAFAPNMQKGVSAAKTIFTFLRRQPSIVDRPGVSRDPWHSEGYVRFDKVKFSYPTR 1082
            ..|.::......||.:.|...:..::|..:.|.|:|......:..|.:..|.:....:.|.||||
plant  1106 FATFALVEPFGLAPYILKRRRSLASVFEIIDRVPTIEPDDTSALSPPNVYGSIELKNIDFCYPTR 1170

  Fly  1083 SEIQVLKGLELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQ 1147
            .|:.||....|.|:.||.:|:||.||.||||.|.||:|:||...|..|:|..|:::.::..||:.
plant  1171 PEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSH 1235

  Fly  1148 LGIVSQEPILFDRTIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLS 1212
            :|::.||||:|..||||||.|.  ..|.::.|:..|.:.:|.|.||::||.||||.:|.:|.:|:
plant  1236 MGLIQQEPIIFSTTIRENIIYA--RHNASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELT 1298

  Fly  1213 GGQKQRIAIARALIRNPKIMLLDEATSALDAESEKVVQDALDAASEG-RTTISIAHRLSTVVHSD 1276
            .||||||||||.:::|..|:|:|||:|::::||.:|||:|||....| :|||.||||::.:.|.|
plant  1299 QGQKQRIAIARVVLKNAPILLIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRVAMMRHVD 1363

  Fly  1277 VIFVFENGLVCEAGDHKQLLANRGLYYTLYKLQSG 1311
            .|.|...|.:.|.|.|..|....|||..|.:...|
plant  1364 NIVVLNGGKIVEEGTHDCLAGKNGLYVRLMQPHFG 1398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 432/1376 (31%)
ABC_membrane 92..382 CDD:279056 75/290 (26%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 119/236 (50%)
ABC_membrane 750..1020 CDD:279056 79/292 (27%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 108/239 (45%)
ABCB6NP_181480.1 PTZ00265 69..1389 CDD:240339 429/1368 (31%)
ABC_membrane 91..364 CDD:279056 75/288 (26%)
P-loop_NTPase 412..646 CDD:304359 119/234 (51%)
ABC_membrane 840..1111 CDD:279056 80/294 (27%)
P-loop_NTPase 1158..1394 CDD:304359 108/237 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 48 1.000 Domainoid score I4479
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X92
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.780

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