DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and abcb5

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:XP_001922717.3 Gene:abcb5 / 798527 ZFINID:ZDB-GENE-030131-6414 Length:1338 Species:Danio rerio


Alignment Length:1334 Identity:560/1334 - (41%)
Similarity:786/1334 - (58%) Gaps:82/1334 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RDRKSFE--PNKSKKKSKHDESDASDEEDGSQYHEDVKQVSYFQLFRYATKKDRALYVIGLLSAV 96
            :|.|..|  |.:....|||......:.:|..   |.:|.|.:||||||||..:..|.:||||.|.
Zfish    31 QDEKPHEDKPEEPPSDSKHKGKKGKNSKDNK---EPMKSVGFFQLFRYATCPEVFLMLIGLLCAA 92

  Fly    97 ATGLTTPANSLIFGNLANDMIDLGGLLESGKSYRADDAISTLLLDKVRQFSLQNT---------- 151
            |.|:..|...::||.:.:..:      :||::|...........:..  |:|.||          
Zfish    93 AHGVALPLMCVVFGQMTDSFV------QSGQTYNLTGFNGNFTSNFT--FTLNNTSTCLAGSPEI 149

  Fly   152 ------------YIGI--IMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGE 202
                        :|||  .:||.....:..|...|..|...||.|:|.:||||.|.|:|.:..||
Zfish   150 GIEPKMTKQAYFFIGIGGAVLVLGTFQVMLFLLTAAKQTKRIRQKYFHAILHQQMSWFDTHPIGE 214

  Fly   203 VASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVA 267
            :..|:.:|::.:.|||.:|:.:||.:..:|:..||:.||.||:|:||.|...||...:..:.:..
Zfish   215 LNIRLTDDINTINDGLGDKIAVFVQFFCSFISGLVIGFVFGWKLTLVILAVSPLLAGSAAVWSKI 279

  Fly   268 TSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFG 332
            .:.|..||:|.||.|..|||..|..||||.||.|:.|.|..|::.:|.||...:|:.:.:.:..|
Zfish   280 LASLTSKELTAYAKAGAVAEEILVAIRTVVAFNGQKKAVEKYEKNLVEAKDFGVKKAISTNVSMG 344

  Fly   333 LLWFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPYIEAFGIA 397
            |..|.::|:||||||||..|.:   .||  |||..|.::|||||||:|:.::|..||.:||...|
Zfish   345 LTQFIVFATYALAFWYGTKLSV---DEP--ENYTIGRVLTVFFSVMIGTFSLGQGAPNLEAIAKA 404

  Fly   398 KGACAKVFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTV 462
            :||..:|:..|:....|:....||.|.:.....||||.:.|.||:|.:|:||..::||:..|:|:
Zfish   405 RGAAYEVYKTIDMPRPIDSSSKEGHKPDRVRGDIEFKNINFNYPSRKDVTILQGMSLKVPHGKTI 469

  Fly   463 ALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENI 527
            ||||.|||||||.|||:||||||.:|.:..:|.:::.|::.|||..:|:|.|||:||.|:|.|||
Zfish   470 ALVGASGCGKSTTIQLLQRFYDPDSGEVTLDGHDIRSLNVRWLRENMGIVSQEPVLFGTTIAENI 534

  Fly   528 RYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILL 592
            ||||||||..:||.|...|||..||.|||...:|:||||||||||||||||||||||:::|:|||
Zfish   535 RYGREDATDADIEQAIKEANAYDFISKLPDKLNTMVGERGAQLSGGQKQRIAIARALVKNPKILL 599

  Fly   593 LDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMEL 657
            ||||||||||.||:.|||||:|..||||||::||||||:|.||.|...::|.|||.|:|:|||..
Zfish   600 LDEATSALDTQSESIVQAALDKARAGRTTIVIAHRLSTIRSADIIAGFSEGRVVEQGSHRELMAK 664

  Fly   658 KDHYFNLVTTQLGEDDGSVLSPTGDIYKNFDIKDEDEEEIKVLSEDEDEDVMVTD---------- 712
            |..|::|||.|........|....|     |.:|:.|||   ..||..:..::..          
Zfish   665 KGVYYSLVTQQTSGRQNEELDANED-----DTQDDSEEE---TGEDSSDPEILEGGVEMKLERGS 721

  Fly   713 -----------EKNKKKKKKKVKDPNEVK------PMLEVMKMNKPEWLQIAVGCISSVIMGCAM 760
                       ..::||.||..||....|      |..:::.:|||:|..:.||..:|::.|...
Zfish   722 FRKSLKRSSKRRSSRKKSKKSRKDKKAKKEEIPEMPFTKILALNKPDWPYLVVGTFASLVGGAVY 786

  Fly   761 PIFAVLFGSILQILSVKDNDQYVRENSNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLTERLRG 825
            |..|:||..|:.:.:..| .:..|:.:..:||.:|:.|:|..:..|.|.:.||.:||.||.|||.
Zfish   787 PCVAILFAKIIGVFAEPD-PEVKRQKTMMFSLLYLLIGVVAFLTYFFQGFMFGKSGELLTMRLRS 850

  Fly   826 LMFEAMLRQEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEW 890
            ..|:|::|||:.||||..|..|.|..:|:.||:.|:||.|.|:|....:|..|.:.:.::..:.|
Zfish   851 QAFKAIVRQEIGWFDDNNNAVGILTTKLATDASLVKGAAGSRLGLATNTICALLIAVIVAFVFCW 915

  Fly   891 SLGLVALAFTPFILIAFYMQRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQNY 955
            .|.|:.||..||:..|.::|....|.........:|...|::.|.|.|.:||.:|.||::|...:
Zfish   916 QLTLLILACVPFLTGANFIQLRATAGHTSKDQSALEMSGKISTETVENFKTVVALTREDVFFHKF 980

  Fly   956 IGMLIPAVEISKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGT 1020
            |..|....:.|.......|:.:.||:::.:...||...:|.|.:.|....:.:||.|...::...
Zfish   981 IDSLSTPYKASLCKAPIYGITFALAQAIPYLVNAAIFRFGAWLIAHCYTEYENVFLVFSVIVFAA 1045

  Fly  1021 ASIANALAFAPNMQKGVSAAKTIFTFLRRQP--SIVDRPGVSRDPWHSEGYVRFDKVKFSYPTRS 1083
            .:|..:.:|||:..|..:||..|...|.::|  .|.|..|  ..|....|.:.|..|:||||||.
Zfish  1046 MNIGQSSSFAPDFAKAKAAAGRIIQLLEKKPEIDIYDESG--ERPSTFSGNIDFKDVQFSYPTRP 1108

  Fly  1084 EIQVLKGLELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQL 1148
            .::||:||.::|.:||.:||||.|||||||.|||::||||...|..|:|..|.::|::..||.|:
Zfish  1109 NVKVLQGLNVSVRQGQTLALVGSSGCGKSTTIQLLERFYDPAGGQVLVDGRDSKSVNLAWLRTQM 1173

  Fly  1149 GIVSQEPILFDRTIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSG 1213
            |:|||||||||.||.|||.||||:|.||.:||..|.||:|||.||..||..|:||:|:||.||||
Zfish  1174 GLVSQEPILFDCTISENIQYGDNSRTVTQEEIEEAAKKANIHNFILTLPDKYNTRVGDKGTQLSG 1238

  Fly  1214 GQKQRIAIARALIRNPKIMLLDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVI 1278
            ||||||||||||:|.||::||||||||||.||||:||.|||.|..|||.|.|||||:|:.::|:|
Zfish  1239 GQKQRIAIARALVRKPKLLLLDEATSALDTESEKIVQAALDEARLGRTCIVIAHRLTTIQNADII 1303

  Fly  1279 FVFENGLVCEAGDHKQLLANRGLYYTLYKLQSGA 1312
            .|.:||.|.|.|.|.||:|.:..|:.|...|..|
Zfish  1304 VVVQNGKVVEQGTHAQLMAKQEAYFALVNAQVSA 1337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 549/1291 (43%)
ABC_membrane 92..382 CDD:279056 109/313 (35%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 147/236 (62%)
ABC_membrane 750..1020 CDD:279056 83/269 (31%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 144/238 (61%)
abcb5XP_001922717.3 PTZ00265 48..1328 CDD:240339 551/1306 (42%)
ABC_membrane 88..389 CDD:279056 109/313 (35%)
ABC_MTABC3_MDL1_MDL2 438..675 CDD:213216 147/236 (62%)
ABC_membrane 776..1046 CDD:279056 83/270 (31%)
ABC_MTABC3_MDL1_MDL2 1095..1334 CDD:213216 144/238 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 198 1.000 Domainoid score I3024
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1057 1.000 Inparanoid score I248
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - otm25966
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.780

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