DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and Abcb8

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_083296.2 Gene:Abcb8 / 74610 MGIID:1351667 Length:717 Species:Mus musculus


Alignment Length:614 Identity:215/614 - (35%)
Similarity:320/614 - (52%) Gaps:80/614 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LYVIGLLSAVATGLTTPANSLIFGNLANDMID--LGGLLESGKSYRADDAISTLLLDKVRQFSLQ 149
            |..:|....:|.|..          |.|..|.  ||.|:|....|..|...|  .:.:.|:.|:|
Mouse   127 LLALGAAIVLALGAA----------LVNVQIPLLLGQLVEIVAKYTRDHMGS--FVSESRKLSVQ 179

  Fly   150 NTYIGIIMLVCSYLSITCFNY------AAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVASRMN 208
                  ::|:.....:..|.|      ......:.:|...|.|:|.||:.::|..::|::.||:.
Mouse   180 ------LLLLYGVQGLLTFGYLVLLSHIGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLT 238

  Fly   209 EDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVAT----- 268
            .|:.:.:......:...:......:||||...:...:|:|:      |..:...|:.|.|     
Mouse   239 TDVQEFKSSFKLVISQGLRSCTQVIGSLVSLSMLSPRLTLM------LAVVTPALMGVGTLMGSG 297

  Fly   269 ----SRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERV--VAAKILNIKRNM-- 325
                ||..::::   |.|..||:.||..:|||:||..|.:|...|:..:  ...|...:.|.:  
Mouse   298 LRKLSRQCQEQI---ARATGVADEALGNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIAL 359

  Fly   326 ---FSGIGFGLL---WFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNI 384
               .|.|.|..:   ..||..|..      .|..:||           |.:::  |.|...::..
Mouse   360 FQGLSNIAFNCMVLGTLFIGGSLV------AGQQLKG-----------GDLMS--FLVASQTVQR 405

  Fly   385 GMAAPYIEAFG-IAKG--ACAKVFHIIEQIPEINPIDGEGKKLNEPLT-TIEFKEVEFQYPTRPE 445
            .||:..: .|| :.:|  |.|:||..:...|.| |:.|.....|:.:. :|.|:.|.|.||.||.
Mouse   406 SMASLSV-LFGQVVRGLSAGARVFEYMALSPVI-PLTGGYCIPNKDIRGSITFQNVTFSYPCRPG 468

  Fly   446 VSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSR-I 509
            .::|....||:..|:.|||||.||.||:|...|::|||||:||::..:|.:|:.|:.:|||.: |
Mouse   469 FNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERFYDPEAGSVTLDGHDLRTLNPSWLRGQVI 533

  Fly   510 GVVGQEPILFATSIYENIRYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQ 574
            |.:.|||:||||:|.||||:|:.||:.||:..||..|||..||...|.||.|:|||||..|||||
Mouse   534 GFISQEPVLFATTIMENIRFGKLDASDEEVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQ 598

  Fly   575 KQRIAIARALIRDPEILLLDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVV 639
            |||:|||||||:.|.:|:|||||||||..||..||.||::.|||||.:::||||||||.|..|:|
Mouse   599 KQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIV 663

  Fly   640 INKGEVVESGTHQELMELKDHYFNLVTTQ 668
            :..|:|.|:|||:||::....|..|:..|
Mouse   664 MANGQVCEAGTHEELLKKGGLYSELIRRQ 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 215/614 (35%)
Abcb8NP_083296.2 MdlB 116..696 CDD:440747 215/614 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 695..717
Blue background indicates that the domain is not in the aligned region.

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