DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and ABCB1

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_001335874.1 Gene:ABCB1 / 5243 HGNCID:40 Length:1350 Species:Homo sapiens


Alignment Length:1313 Identity:576/1313 - (43%)
Similarity:804/1313 - (61%) Gaps:61/1313 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LGAKLEDSDRD----RKSFEP--NKSKKKSKHDESDASDEEDGSQYHEDVKQVSYFQLFRYATKK 83
            :|..|| .||:    :|:|..  |||:|..|                |....||.|.:|||:...
Human    69 VGMDLE-GDRNGGAKKKNFFKLNNKSEKDKK----------------EKKPTVSVFSMFRYSNWL 116

  Fly    84 DRALYVIGLLSAVATGLTTPANSLIFGNLANDMIDLGGL--LESGKSYRA---DDAISTLLLDKV 143
            |:...|:|.|:|:..|...|...|:||.:.:...:.|.|  |.|..:.|:   |......|.:.:
Human   117 DKLYMVVGTLAAIIHGAGLPLMMLVFGEMTDIFANAGNLEDLMSNITNRSDINDTGFFMNLEEDM 181

  Fly   144 RQFSLQNTYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVASRMN 208
            .:::...:.||..:||.:|:.::.:..||..||..||.:||.:|:.|::.|:|.:..||:.:|:.
Human   182 TRYAYYYSGIGAGVLVAAYIQVSFWCLAAGRQIHKIRKQFFHAIMRQEIGWFDVHDVGELNTRLT 246

  Fly   209 EDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVATSRLAK 273
            :|:||:.:|:.:|:.||...:..|....::.|.:||:|:||.|...|:..::..:.|...|....
Human   247 DDVSKINEGIGDKIGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSSFTD 311

  Fly   274 KEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWFFI 338
            ||:..||.|..|||..|:.||||.||.|:.||:..|.:.:..||.:.||:.:.:.|..|..:..|
Human   312 KELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISIGAAFLLI 376

  Fly   339 YASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPYIEAFGIAKGACAK 403
            |||||||||||..||:.|       .|..|.::||||||::|:.::|.|:|.||||..|:||..:
Human   377 YASYALAFWYGTTLVLSG-------EYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYE 434

  Fly   404 VFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPS 468
            :|.||:..|.|:.....|.|.:.....:||:.|.|.||:|.||.||..||||:..||||||||.|
Human   435 IFKIIDNKPSIDSYSKSGHKPDNIKGNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNS 499

  Fly   469 GCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENIRYGRED 533
            ||||||.:||:||.|||..|.:..:|.:::.:::.:||..||||.|||:||||:|.||||||||:
Human   500 GCGKSTTVQLMQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENIRYGREN 564

  Fly   534 ATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATS 598
            .|.:|||.|...|||..||.|||..:|||||||||||||||||||||||||:|:|:|||||||||
Human   565 VTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATS 629

  Fly   599 ALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMELKDHYFN 663
            ||||.|||.||.||:|...|||||::||||||||.||.|...:.|.:||.|.|.|||:.|..||.
Human   630 ALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFK 694

  Fly   664 LVTTQLGEDDGSVLSPTGDIYKNFDIKDEDEEEIKVLSEDEDE-------------DVMVTDEKN 715
            |||.|          ..|:..:..:..||.:.||..|....::             .|..:..::
Human   695 LVTMQ----------TAGNEVELENAADESKSEIDALEMSSNDSRSSLIRKRSTRRSVRGSQAQD 749

  Fly   716 KKKKKKKVKDPNEVKPM--LEVMKMNKPEWLQIAVGCISSVIMGCAMPIFAVLFGSILQILSVKD 778
            :|...|:..| ..:.|:  ..:||:|..||....||...::|.|...|.||::|..|:.:.:..|
Human   750 RKLSTKEALD-ESIPPVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRID 813

  Fly   779 NDQYVRENSNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLTERLRGLMFEAMLRQEVAWFDDKA 843
            :.:..|:|||.:||.||..||:..|..|||.:.||.|||.||:|||.::|.:||||:|:||||..
Human   814 DPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPK 878

  Fly   844 NGTGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEWSLGLVALAFTPFILIAFY 908
            |.||:|..||:.|||.|:||.|.|:..|.|:|:.|..||.:|..|.|.|.|:.||..|.|.||..
Human   879 NTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGV 943

  Fly   909 MQRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQNYIGMLIPAVEISKRNTHFR 973
            ::..:::.:.:...|.:|...|:|.|.:.|.|||.||.:|:.|...|...|......|.|..|..
Human   944 VEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIF 1008

  Fly   974 GLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANALAFAPNMQKGVS 1038
            |:.:...:::|:|:||.|..:|.:.|.|:.:.|.||..|..|::.|..::....:|||:..|...
Human  1009 GITFSFTQAMMYFSYAGCFRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKI 1073

  Fly  1039 AAKTIFTFLRRQPSIVDRPGVSRDPWHSEGYVRFDKVKFSYPTRSEIQVLKGLELAVSKGQKIAL 1103
            :|..|...:.:.|.|.........|...||.|.|.:|.|:||||.:|.||:||.|.|.|||.:||
Human  1074 SAAHIIMIIEKTPLIDSYSTEGLMPNTLEGNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLAL 1138

  Fly  1104 VGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPILFDRTIRENISY 1168
            ||.|||||||.:||::||||...|..|:|..:::.:::..||..||||||||||||.:|.|||:|
Human  1139 VGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAY 1203

  Fly  1169 GDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARALIRNPKIML 1233
            |||:|.|:.:||:.|.|::|||.||.:||..|.|::|:||.||||||||||||||||:|.|.|:|
Human  1204 GDNSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILL 1268

  Fly  1234 LDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEAGDHKQLLAN 1298
            |||||||||.|||||||:|||.|.||||.|.|||||||:.::|:|.||:||.|.|.|.|:||||.
Human  1269 LDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQ 1333

  Fly  1299 RGLYYTLYKLQSG 1311
            :|:|:::..:|:|
Human  1334 KGIYFSMVSVQAG 1346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 561/1258 (45%)
ABC_membrane 92..382 CDD:279056 101/294 (34%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 152/236 (64%)
ABC_membrane 750..1020 CDD:279056 105/269 (39%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 146/238 (61%)
ABCB1NP_001335874.1 PTZ00265 123..1337 CDD:240339 552/1231 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I2842
eggNOG 1 0.900 - - E2759_KOG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55496
Inparanoid 1 1.050 1026 1.000 Inparanoid score I275
Isobase 1 0.950 - 0 Normalized mean entropy S1571
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - otm40248
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R932
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1413.760

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