DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and abcb5

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:XP_031759158.1 Gene:abcb5 / 394865 XenbaseID:XB-GENE-5950198 Length:1317 Species:Xenopus tropicalis


Alignment Length:1309 Identity:545/1309 - (41%)
Similarity:788/1309 - (60%) Gaps:55/1309 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KDDVNSRSQYKTNIVLGAKLEDSDRDRKSFEPNKSKKKSKHDESDASDEEDGSQYHEDVKQVSYF 74
            |:|::  ::|..|.   :|..|:..|...:|..|..:|:|.::.                 :...
 Frog    54 KEDMD--TEYAVNT---SKNTDTLLDNAQYETTKENEKNKQEQI-----------------IGPI 96

  Fly    75 QLFRYATKKDRALYVIGLLSAVATGLTTPANSLIFGNLANDMIDLGGLLESGKSYRADDAISTLL 139
            .:|::|...|..|.:||.|.|:..|...|..:::||.:::..:.....|::..:......|.   
 Frog    97 SIFQFADWLDIFLMIIGTLGAIGCGSCYPLMNVVFGEMSDSFLCHNSSLQNSSACAKFKPIE--- 158

  Fly   140 LDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVA 204
             :::::|||....:|..:|.|.||.::|:..||..|...:|..||.|:|.|::.|:|..:||::.
 Frog   159 -EEIQKFSLYYAGLGFAVLFCGYLQVSCWVVAASRQTRKMRKAFFHSVLSQEIGWFDVTKSGDLN 222

  Fly   205 SRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVATS 269
            :|:.|:::|:.||:.:||..|.......|..:::..::||:|:||.|.:.|:..:|..:.:....
 Frog   223 TRLTENINKINDGIGDKVAHFFQNTTICVSGILIGLIQGWKLALVILATSPVLTLASAMFSRIVV 287

  Fly   270 RLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLL 334
            .|..||:..||.|..||:..||.||||.||.||.||:..|.|.:..||.:.||:::.|....||:
 Frog   288 SLTTKELAAYAKAGAVAQEVLSSIRTVVAFGGEEKEIKRYTENLKQAKDIGIKKSIASQFALGLV 352

  Fly   335 WFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPYIEAFGIAKG 399
            ....||:|.:.||||..||::.      ::|..|.::.|||:|...|..||.||.:.|||.||:.
 Frog   353 NGAFYATYGVGFWYGTTLVLED------DDYTIGDVMAVFFNVSFSSYAIGQAASHFEAFHIARA 411

  Fly   400 ACAKVFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVAL 464
            |.:.:|.:|:|...|:....:|.|.:.....||.|::.|.||:||.|.:||.|||.:..||||||
 Frog   412 AASSIFKVIKQSSSIDNFSNDGFKPDNIKGNIELKDIYFSYPSRPGVKVLNGLNLSVKSGQTVAL 476

  Fly   465 VGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENIRY 529
            ||.|||||||.:||:||.|||:.|.|..:|.::|.|::.:.|..||||.|||:||.|:|.:||||
 Frog   477 VGQSGCGKSTIVQLLQRLYDPKEGTLAVDGHDIKSLNVTYYRELIGVVSQEPVLFGTTIKQNIRY 541

  Fly   530 GREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLD 594
            ||:|.|.||||.|...|||..||..||..|:|||||||||||||||||||:||||:|:|:|||||
 Frog   542 GRDDVTDEEIEKAVKEANAYDFIMALPDKYETLVGERGAQLSGGQKQRIAVARALVRNPKILLLD 606

  Fly   595 EATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMELKD 659
            ||||||||.|||.|||||:|...|||||:|||||||:..||.||||:.|.|.|.|||.||||.|.
 Frog   607 EATSALDTGSEAVVQAALDKARKGRTTIVVAHRLSTIWTADVIVVIDNGAVAEQGTHSELMEKKG 671

  Fly   660 HYFNLV---TTQLGEDDGSV-LSPTGDIYKNFDI----KDEDEEEIKVLSEDEDEDVMVTDEKNK 716
            .||:|.   |.||.:|:.:. .:..|.||:...:    ..:...:.|:| |||||      |:..
 Frog   672 IYFSLATAQTVQLSDDNETTEKNQNGIIYEKASLIQRFNSQTSLKSKIL-EDEDE------EEES 729

  Fly   717 KKKKKKVKDPNEVKPMLEVMKMNKPEWLQIAVGCISSVIMGCAMPIFAVLFGSILQILSVKDNDQ 781
            ||....|.       ..:::|:|:.||..|.:|.|::.::|..:|:|.:.:..|:.:.:..| .:
 Frog   730 KKDLPTVS-------FFQLLKLNRSEWPYILLGIIAAGVIGSLLPLFCIFYARIIAVFASND-PE 786

  Fly   782 YVRENSNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLTERLRGLMFEAMLRQEVAWFDDKANGT 846
            .:|:.|:..||.|.:.|:|:.:|...:.|.||.:||.||.|||.:.|:||::|::||||||.|.|
 Frog   787 TIRKESDLCSLIFGLTGVVILLAYIARGYMFGRSGETLTMRLRHMAFKAMIQQDIAWFDDKDNNT 851

  Fly   847 GSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEWSLGLVALAFTPFILIAFYMQR 911
            |:|..||:.||:.:|.|||.|:|.:.:::..:.|.:.::..|.|.|.|:.||..||::|...::.
 Frog   852 GALTTRLATDASEIQTATGYRLGFLAENLIGIVLTVIIAFVYGWELALLGLAMAPFMVICGLLEF 916

  Fly   912 TLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQNYIGMLIPAVEISKRNTHFRGLV 976
            :.:........|.::...|:|.|.|.||||:.||.||..|.:.|...|......|.|.....||.
 Frog   917 SALTGFATRDKKQLQRAGKIATEAVDNIRTLVSLTRERTFEEMYSESLQKPYRNSLRKAQIYGLY 981

  Fly   977 YGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANALAFAPNMQKGVSAAK 1041
            :.:..:..:|.:||...:|.:.:.:..|...:...|...:..|..::...|.|||:..|..|||:
 Frog   982 FAIGHAFYYFTHAALFCFGAYLIKYERINVEEALLVFSVITFGAMTLGTTLTFAPDYAKATSAAR 1046

  Fly  1042 TIFTFLRRQPSIVDRPGVSRDPWHSEGYVRFDKVKFSYPTRSEIQVLKGLELAVSKGQKIALVGP 1106
            .:|.....:|:|.......:.|....|.:.|..|.|:|||||:::||:.|.:.|..||.:|.||.
 Frog  1047 YLFALFESKPAIDSSSQQGQKPDCFSGSLEFRNVSFNYPTRSDVRVLRDLCVKVESGQTVAFVGS 1111

  Fly  1107 SGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPILFDRTIRENISYGDN 1171
            |||||||.:||:|||||..||..|:|:.|.:..::..||:|:|||||||:|||.:|.|||:||||
 Frog  1112 SGCGKSTSVQLLQRFYDPKEGEVLLDDVDAKCFNVQWLRSQMGIVSQEPVLFDCSIAENIAYGDN 1176

  Fly  1172 ARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARALIRNPKIMLLDE 1236
            :|.|:..||.||.|.:|||.||..|||.|:|.:|.||.||||||||||||||||||.|||:||||
 Frog  1177 SRTVSMDEIQSAAKAANIHSFIEGLPLKYETLVGAKGTQLSGGQKQRIAIARALIRAPKILLLDE 1241

  Fly  1237 ATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEAGDHKQLLANRGL 1301
            ||||||.|||||||.|||.|.:|||.|.|||||:||.::|:|.|...|.:.|.|.|::|||..|.
 Frog  1242 ATSALDNESEKVVQQALDQARKGRTCILIAHRLTTVQNADIIVVMNKGKIIEHGSHQELLAKCGA 1306

  Fly  1302 YYTLYKLQS 1310
            ||.|...|:
 Frog  1307 YYDLVNAQA 1315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 533/1246 (43%)
ABC_membrane 92..382 CDD:279056 91/289 (31%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 154/239 (64%)
ABC_membrane 750..1020 CDD:279056 84/269 (31%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 144/238 (61%)
abcb5XP_031759158.1 PTZ00265 164..1311 CDD:240339 518/1167 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 194 1.000 Domainoid score I3111
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1029 1.000 Inparanoid score I275
OMA 1 1.010 - - QHG63700
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - otm47420
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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