DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and CG9270

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_995741.2 Gene:CG9270 / 35366 FlyBaseID:FBgn0032908 Length:1292 Species:Drosophila melanogaster


Alignment Length:1389 Identity:305/1389 - (21%)
Similarity:586/1389 - (42%) Gaps:265/1389 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 RKSFEPNKSKKKSKHDESDASDEEDGSQYHEDVKQVSYFQLFRYATKKDRA-----LYVIG---L 92
            :|:.||.......|..:::...::..:.:..:|:...      .:.||:.:     |.|.|   .
  Fly    34 KKTLEPTDLYNALKEHKAETLGDKFFATWQSEVRSCG------DSPKKEPSIIRVILKVFGWQLF 92

  Fly    93 LSAVATGLTTPANSLIFGNLANDMIDLGGLL-ESGKSYRADDAISTLLLDKVRQFSLQNTYIGII 156
            ||.:..|:      |..|..|...:.||.|: |..::...|              .|.....|:.
  Fly    93 LSGIVVGV------LELGTRATLPLILGALIAEFTRNGNGD--------------GLWAQIYGLT 137

  Fly   157 MLVCSYLSITCFN-------YAAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVASRMNEDLSKM 214
            :::....|:..|:       :.|....:.:.:..:|..|...........:|:|.:.::.||.:.
  Fly   138 LILSILFSVLMFHPLMMGLMHLAMKMRVAVSTAIYRKALRLSRTALGDTTTGQVVNLISNDLGRF 202

  Fly   215 EDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQL-----------SLVCLTSLPL-TFIAMGLVAVA 267
            :..|       :|:...::|.|.| .:..:.|           .::.|..||: ||::.     .
  Fly   203 DRAL-------IHFHFLWLGPLEL-LISSYFLYQQIGVASLYGIVILLLFLPIQTFLSR-----L 254

  Fly   268 TSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKR-NMFSGIGF 331
            ||||..:..........:....:|||:.:|.:..| |......||:..:::.:|:: |...|.  
  Fly   255 TSRLRHQTALRTDQRVRMMNEIISGIQVIKMYTWE-KPFGRLIERLRRSEMSSIRKVNYIRGT-- 316

  Fly   332 GLLWFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSM------NIGMAAPY 390
             ||.|.|..|....|...:|.|:.|....|...:.    :|.|::::..::      .:...|..
  Fly   317 -LLSFEITLSRIAIFVSLLGFVLMGGELTAERAFS----VTAFYNILRRTVCKFFPSGMSQFAEM 376

  Fly   391 IEAFGIAKGACAKVFHIIEQIPEINPIDGEGKKL--NEPLTTIEFKEVEFQYP-TRPEVSILNKL 452
            :......||     |.:..:...:....|:..||  .|||..::..:..:.:. ..|   :|..:
  Fly   377 MVTLRRIKG-----FMMRSETEALYLKGGQTNKLFEGEPLVKLQSFQARWNHDHVEP---VLENI 433

  Fly   453 NLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPI 517
            |:.:...|.||::||.|.|||:.||.:......::|.|...|      ||::       ..|||.
  Fly   434 NISLSPPQLVAVIGPVGSGKSSLIQAILGELPGESGKLKVQG------DISY-------ASQEPW 485

  Fly   518 LFATSIYENIRYG------------REDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQL 570
            ||..|:.:||.:|            |..|...:.|              |..|..|.||||||.|
  Fly   486 LFNASVRDNILFGLPMDKHRYRNVIRNCALERDFE--------------LLHGDRTFVGERGASL 536

  Fly   571 SGGQKQRIAIARALIRDPEILLLDEATSALDT-ASEAKVQAALEKVSAGRTTIIVAHRLSTVRRA 634
            ||||:.||::|||:.|..:..|||:..||:|| ......:..:......:..|:|.|:|..:..|
  Fly   537 SGGQRARISLARAVYRQADTYLLDDPLSAVDTHVGRHLFEECMRGFLRDKLVILVTHQLQFLEHA 601

  Fly   635 DRIVVINKGEVVESGTHQELMELKDHYFNLVTTQLGEDDGSVLSPTGDIYKNFDIKDEDEEEIKV 699
            |.||:::||::...||::|::            :.|:|.|.:|:....     ::.|.::|::..
  Fly   602 DLIVIMDKGKISAVGTYEEML------------KSGQDFGKLLATEAQ-----EMGDSNQEQVNA 649

  Fly   700 LSEDEDEDVMVTDEKNKKKK---------KKKVKDPNEVKPMLEVMKMNKPEWLQIAVGCIS--- 752
            ..:..::....:.:.::..:         .:.:.| ||.:|..|.....|     |.:|...   
  Fly   650 EGDSRNDKSTYSRQSSRVSRVSVTSVDSSTESILD-NERQPAQESRSQGK-----IGLGIYGKYF 708

  Fly   753 SVIMGCAMPIFAVLFGSILQILS----------VKDNDQYVRENSNQYSLYFLIAGIVVGIATFL 807
            |...|..|.|....|....|||:          ||:||     :|:...:| :.:||...:..|.
  Fly   709 SAGSGWLMVILVAFFCLGTQILASGGDYFLSYWVKNND-----SSSSTDIY-IFSGINAALVIFA 767

  Fly   808 ---QIYFFGIAGERLTERLRGLMFEAMLRQEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIG 869
               .:.||.:|....|: |...||:.:.|..:.:|  .||.:|.:..|.:.|...|.......:.
  Fly   768 LLRTLLFFSMAMHSSTQ-LHNTMFQGVSRTALYFF--HANPSGRILNRFAMDLGQVDEILPAVML 829

  Fly   870 TIVQSISTLALGIALSMYYEWSLGLVALAFTPFILI-------AFYMQRTLMAKENMGSAKTMEN 927
            ..:|...|:: ||         :|::.:. .|:.||       ||:..||..    :.:::.::.
  Fly   830 DCIQIFLTIS-GI---------IGVLCIT-NPWYLINTITMFLAFHFLRTFY----LSTSRDLKR 879

  Fly   928 CTKLA--------VEVVSNIRTVASLGREEMF---HQNYIGMLIPAVEISKRNTHFRGLVYGLAR 981
            ...:|        ...::.:.|:.::..:::.   :.||            ::.|..| .|....
  Fly   880 LEAIARSPMYSHFSATLNGLSTIRAMEAQDLLTKEYDNY------------QDIHSSG-YYTFLS 931

  Fly   982 SLMFFAYAACMYYGTWCVIH-RGILFGDVFK------------VSQALIMGTASIANALAFAPNM 1033
            :...|.|    |...:||.: ..:.....|.            ::||:.| |.::...:..:..:
  Fly   932 TNRAFGY----YLDLFCVAYVISVTLMSYFNPPVDNPGQIGLVITQAMSM-TGTVQWGMRQSAEL 991

  Fly  1034 QKGVSAAKTIFTFLRRQ-PSIVDRPGVSRDP--WHSEGYVRFDKVKFSY-PTRSEIQVLKGLELA 1094
            :..:::.:.:..:...: ....:.|...:.|  |..||.:..:::...| |.....:|||.|...
  Fly   992 ENSMTSVERVLEYRHLEAEGEFESPDDKKPPMNWPQEGLISAEQLSLRYNPDPKADRVLKSLNFI 1056

  Fly  1095 VSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPILFD 1159
            :...:||.:||.:|.|||:.|..:.|. ..:||:.:||..|:..:.:.:||:::.|:.|||:||.
  Fly  1057 IMPREKIGIVGRTGAGKSSLINALFRL-SYNEGSLVIDNTDILGIGLHDLRSKISIIPQEPVLFS 1120

  Fly  1160 RTIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARA 1224
            .|:|.|:   |......|:::..|.::.::.:.::.||.|.::.:.|.|:..|.||:|.:.:|||
  Fly  1121 GTLRCNL---DPFEQYADEKLWEALEEVHLKDEVSELPNGLESVVAEGGSNYSVGQRQLVCLARA 1182

  Fly  1225 LIRNPKIMLLDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEA 1289
            ::|..:|:::||||:.:|.:::.::|..:.......|.::|||||:|::.||.:.|.:.|.:.|.
  Fly  1183 ILRENRILVMDEATANVDPQTDALIQSTIRRKFRDCTVLTIAHRLNTIIDSDRVMVLDAGTLVEF 1247

  Fly  1290 GDHKQLLAN--RGLYYTLYKLQSG 1311
            |...:||..  ..::|.:. ||:|
  Fly  1248 GSPFELLTQSWSKVFYGMV-LQTG 1270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 297/1351 (22%)
CG9270NP_995741.2 PLN03130 10..1289 CDD:215595 305/1389 (22%)

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