Sequence 1: | NP_523740.3 | Gene: | Mdr50 / 36582 | FlyBaseID: | FBgn0010241 | Length: | 1313 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_114444.2 | Gene: | Tap1 / 24811 | RGDID: | 3817 | Length: | 725 | Species: | Rattus norvegicus |
Alignment Length: | 564 | Identity: | 183/564 - (32%) |
---|---|---|---|
Similarity: | 286/564 - (50%) | Gaps: | 58/564 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 138 LLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAA-----------HSQILTIRSKFFRSILHQD 191
Fly 192 MKWYDFNQSGEVASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFV--KGWQLSLVCLTSL 254
Fly 255 PLTFIAMGLVAVATSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKIL 319
Fly 320 NIKRNM----------FSG--IGFGLLWFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMIT 372
Fly 373 VFFSVMMGSMNIGMAAPYIEAFGIAKGACAKVFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVE 437
Fly 438 FQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDI 502
Fly 503 NWLRSRIGVVGQEPILFATSIYENIRYG-REDATREEIEAAAAAANAAIFIKKLPKGYDTLVGER 566
Fly 567 GAQLSGGQKQRIAIARALIRDPEILLLDEATSALDTASEAKVQAALEKVS--AGRTTIIVAHRLS 629
Fly 630 TVRRADRIVVINKGEVVESGTHQELMELKDHYFNLVTTQLGEDD 673 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mdr50 | NP_523740.3 | PTZ00265 | 69..1308 | CDD:240339 | 183/564 (32%) |
ABC_membrane | 92..382 | CDD:279056 | 66/268 (25%) | ||
ABC_MTABC3_MDL1_MDL2 | 431..668 | CDD:213216 | 107/239 (45%) | ||
ABC_membrane | 750..1020 | CDD:279056 | |||
ABC_MTABC3_MDL1_MDL2 | 1070..1309 | CDD:213216 | |||
Tap1 | NP_114444.2 | 3a01208 | 2..717 | CDD:273363 | 181/554 (33%) |
ABC_membrane | 177..435 | CDD:279056 | 66/270 (24%) | ||
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 | 352..397 | 10/44 (23%) | |||
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 | 430..464 | 5/34 (15%) | |||
P-loop_NTPase | 469..697 | CDD:304359 | 100/228 (44%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24221 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.100 |