DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and Abcc10

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_001334325.1 Gene:Abcc10 / 224814 MGIID:2386976 Length:1526 Species:Mus musculus


Alignment Length:1389 Identity:319/1389 - (22%)
Similarity:553/1389 - (39%) Gaps:306/1389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 RALY--------VIGLLSAVAT--GLTTPANSLIFGNLANDMIDLGGLLESGKSYRADDAISTLL 139
            ||||        .:|||..|.|  |.:.|   |:...|.       |.||.|:...:...:..|.
Mouse   276 RALYRAFGCCYLALGLLKMVGTMLGFSGP---LLLSLLV-------GFLEEGQEPLSHGLLYVLG 330

  Fly   140 L--DKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFN-QSG 201
            |  ..|....|||.|                .|......|..|.....::..:.:|..... .:|
Mouse   331 LAGGTVISAVLQNQY----------------GYEVRKVTLQARVAVLSTLYRKALKLGPSRPPTG 379

  Fly   202 EVASRMNEDLSKMED---------GLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLT 257
            ||.:.:..|..::.:         ||..::.:.::.|...||   :||:.|..|:|:.   :|:.
Mouse   380 EVLNLLGTDSERLLNFAGSFHEAWGLPLQLAITLYLLYQQVG---MAFLAGLVLALLL---VPVN 438

  Fly   258 FIAMGLVAVATSRLA-KKEVTMYAGAAV-VAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILN 320
            .:      :||..:| .:|:..:..|.| :....|||||.:|.|..|    .|..:||.|.:...
Mouse   439 KV------IATRIMASNQEMLRHKDARVKLMTELLSGIRVIKFFRWE----QALGDRVKACRTKE 493

  Fly   321 IKRNMFSGIGFGLLWFFIYASYALAF-WYGVGLVIKGYHEPAYENYDAGTMITVFFS-VMMG--- 380
            :          |.|....|...|..: |..:.:||               .||:|.: |:||   
Mouse   494 L----------GRLRVIKYLDAACVYLWAALPVVI---------------CITIFITYVLMGHQL 533

  Fly   381 -SMNIGMAAPYIEAF------------GI--AKGACAKVFHIIEQIPEINP-----IDGEGKKLN 425
             :..:..|...:...            |:  :|.:..::...:: :|..:|     .|...    
Mouse   534 TATKVFTALALVRMLILPLNNFPWVINGLLESKVSLDRIQRFLD-LPSYSPEAYYSPDPPA---- 593

  Fly   426 EPLTTIEFKEVEFQYPTRPEVSILNKL---NLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQA 487
            ||.|.:|..|..|.:   ..:....|.   :|::.:|..|.:||..|||||:.:..:........
Mouse   594 EPSTALELHEALFSW---DPIGASQKTFISHLQVKKGMLVGIVGKVGCGKSSLLAAITGELHRLC 655

  Fly   488 GNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENIRYGRE-DAT--REEIEAAAAAANAA 549
            |.:.          ::.|....|:..|||.:...:|.:||.:|:. ||.  ||.:||.|...:.:
Mouse   656 GWVA----------VSELSKGFGLATQEPWIQCATIRDNILFGKTFDAQLYREVLEACALNDDLS 710

  Fly   550 IFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATSALDT-ASEAKVQAALE 613
            |    ||.|..|.|||:|..|||||:.|||:|||:.::..:.|||:..:|:|. .:...:...:.
Mouse   711 I----LPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKALYLLDDPLAAVDADVANHLLHRCIL 771

  Fly   614 KVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMELKDHYFNLVTTQLGEDDGSVLS 678
            .|.:..|.::..||...:.|||.::::..|::|.:|...|::.|    ...|.|...|.:  .::
Mouse   772 GVLSHTTRLLCTHRTEYLERADVVLLMEAGQLVRTGPPSEILPL----VQAVPTAWAEKE--QVA 830

  Fly   679 PTGDIYKNFDIKDEDEEEIKVLSEDEDEDVMVTDEKNKKKKKKKVKDPNEVKPMLEVMKMNKPEW 743
            .:|......|::...|||::|  |......:|.:|.         |....|     .:.:.:..|
Mouse   831 TSGQSPSVCDLERTTEEELEV--EQSTCGCLVQEES---------KSEGAV-----ALHVYRAYW 879

  Fly   744 LQIAVGCISSVIMGCAM----------------------------------PIFAVLFGSILQIL 774
            ..:..|..:::::...:                                  |....||...|.:.
Mouse   880 RAMGSGLAAAILVSLLLMQATRNGADWWLAHWLSQLKAGRNGSREDPASCSPGSTALFSPRLLLF 944

  Fly   775 SVKDNDQYV--------RENSN---QYSLYFLIAGIVVGI---ATFLQIYFFGIAGERLTERLRG 825
            |  ..:.|.        :..||   ....|.::...:.|:   .|.|:...|.....:....|..
Mouse   945 S--PGNLYTPLLSTPLHKAASNGTADVHFYLIVYATIAGVNSLCTLLRAVLFAAGALQAAASLHH 1007

  Fly   826 LMFEAMLRQEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIGTIV-QSISTLALGIALSMYYE 889
            .:...:|...|.::|  :..:|.:..|.|.|.|.|..:....:..:: .|:..|.|...|.....
Mouse  1008 RLLHRLLMAPVTFYD--STPSGRVLNRFSSDVACVDDSLPFLLNILLANSVGLLGLLAVLGSGLP 1070

  Fly   890 WSLGLV-ALAFTPFILIAFYMQRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQ 953
            |.|.|: .|:|..:.:..:| :.:......:||.......:.|| :.::.:..:.:.|....|.:
Mouse  1071 WLLLLLPPLSFVYYSVQGYY-RASFRELRRLGSLTWSPLYSHLA-DTLAGLPVLRAAGATYRFEE 1133

  Fly   954 NYIGMLIPAVEISKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFK--VSQAL 1016
            ....:|    |:::|              ..|.:||...    |..|...::...|..  ...||
Mouse  1134 ENQRLL----ELNQR--------------CQFASYATMQ----WLDIRLQLMGAAVVSAIAGIAL 1176

  Fly  1017 IMGTASIAN------ALAFAPNMQKGVSAAKTIFTFLRRQPSIVDR------------------- 1056
            :.....:||      .|::|.::...:|...:.||........|:|                   
Mouse  1177 VQHQQGLANPGLVGLVLSYALSLTGLLSGLVSSFTQTEAMMVSVERLEEYSCDVPQEPHSQPLQS 1241

  Fly  1057 PGVSRDPWHSEGYVRFDKVKFSY----PTRSEIQVLKGLELAVSKGQKIALVGPSGCGKSTCIQL 1117
            |...|..|.::|.|.|..|...|    |     ..|.|:...|..|:|:.:||.:|.|||:...:
Mouse  1242 PHQQRISWLTQGSVEFQDVVLVYRPGLP-----NALDGVTFRVEPGEKLGIVGRTGSGKSSLFLV 1301

  Fly  1118 IQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPILFDRTIRENIS----YGDNAR-NVTD 1177
            :.|..:.:.|..|:|..|...:.:..||:||.::.|||.||..|||||:.    :.|.|. ...:
Mouse  1302 LFRLLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALE 1366

  Fly  1178 QEIIS----------ACKKS-----NIH-EFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARALI 1226
            |..:|          ||::|     |.| :..|.|..|.|..:||:|..||.||:|.:.:||||:
Mouse  1367 QCHLSEVAVAMGESQACQRSQREAKNGHWQCSALLTGGLDGELGERGQNLSLGQRQLLCLARALL 1431

  Fly  1227 RNPKIMLLDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEAGD 1291
            .:.||:.:||||:::|.::::::|..:......:|.::|||||:|:::||.:.|.:.|.|.|. |
Mouse  1432 TDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVEL-D 1495

  Fly  1292 HKQLLANR--GLYYTLYK-LQSGA 1312
            ....|.|:  .|:..|.: .|.||
Mouse  1496 SPSALRNQPHSLFQQLLQSSQQGA 1519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 316/1383 (23%)
ABC_membrane 92..382 CDD:279056 69/311 (22%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 69/243 (28%)
ABC_membrane 750..1020 CDD:279056 50/321 (16%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 86/266 (32%)
Abcc10NP_001334325.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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