DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and ABCB8

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_001269220.1 Gene:ABCB8 / 11194 HGNCID:49 Length:735 Species:Homo sapiens


Alignment Length:599 Identity:211/599 - (35%)
Similarity:313/599 - (52%) Gaps:59/599 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   741 PEWLQIAVG---CISSVIMGCAMPIFAVLFGSILQILSVKDNDQYVREN-------SNQYSLYFL 795
            |..|.:.|.   .:.:.::...:|:   |.|.::::::     :|.|::       |...|.:.|
Human   143 PHLLVLGVAVVLALGAALVNVQIPL---LLGQLVEVVA-----KYTRDHVGSFMTESQNLSTHLL 199

  Fly   796 IAGIVVGIATFLQIYFFGIAGERLTERLRGLMFEAMLRQEVAWFDDKANGTGSLCARLSGDAAAV 860
            |...|.|:.||..:......|||:...:|..:|.::|||::.:||  ||.||.|.:||:.|....
Human   200 ILYGVQGLLTFGYLVLLSHVGERMAVDMRRALFSSLLRQDITFFD--ANKTGQLVSRLTTDVQEF 262

  Fly   861 QGATGQRIGTIVQSISTLALG--IALSMYYEWSLGLVALAFTPFILIAFYMQRTLMAKENMGSAK 923
            :.:....|...::|.:.:| |  ::||| ....|.|:.:..||    |.....|||..   |..|
Human   263 KSSFKLVISQGLRSCTQVA-GCLVSLSM-LSTRLTLLLMVATP----ALMGVGTLMGS---GLRK 318

  Fly   924 TMENCTK-------LAVEVVSNIRTVASLGREEMFHQNYIGML----IPAVEISKRNTHFRGLVY 977
            ....|.:       :|.|.:.|:|||.:...|:...:.|...|    ..|.|:.:....|:||  
Human   319 LSRQCQEQIARAMGVADEALGNVRTVRAFAMEQREEERYGAELEACRCRAEELGRGIALFQGL-- 381

  Fly   978 GLARSLMFFAYAACMYYGTW-----CVIHRGILFGDVFKVSQALIMGTASIANALAFAPNMQKGV 1037
               .::.|    .||..||.     .|..:.:..||:.....|......|:||.......:.:|:
Human   382 ---SNIAF----NCMVLGTLFIGGSLVAGQQLTGGDLMSFLVASQTVQRSMANLSVLFGQVVRGL 439

  Fly  1038 SAAKTIFTFLRRQPSIVDRPGVSRDPWHSEGYVRFDKVKFSYPTRSEIQVLKGLELAVSKGQKIA 1102
            ||...:|.::...|.|....|.........|.|.|..|.||||.|...:|||...|.:..|:.:|
Human   440 SAGARVFEYMALNPCIPLSGGCCVPKEQLRGSVTFQNVCFSYPCRPGFEVLKDFTLTLPPGKIVA 504

  Fly  1103 LVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQ-LGIVSQEPILFDRTIRENI 1166
            |||.||.||:|...|::||||...|..::|..|:|.:..:.||.| :|.:||||:||..||.|||
Human   505 LVGQSGGGKTTVASLLERFYDPTAGVVMLDGRDLRTLDPSWLRGQVVGFISQEPVLFGTTIMENI 569

  Fly  1167 SYGDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARALIRNPKI 1231
            .:|  ....:|:|:.:|.:::|.||||.:.|.||:|.:||:|..||||||||:|||||||:.|.:
Human   570 RFG--KLEASDEEVYTAAREANAHEFITSFPEGYNTVVGERGTTLSGGQKQRLAIARALIKQPTV 632

  Fly  1232 MLLDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEAGDHKQLL 1296
            ::|||||||||||||:|||:|||.||.|||.:.||||||||..:..|.|..:|.|.|||.|::||
Human   633 LILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRGAHCIVVMADGRVWEAGTHEELL 697

  Fly  1297 ANRGLYYTLYKLQS 1310
            ...|||..|.:.|:
Human   698 KKGGLYAELIRRQA 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 210/595 (35%)
ABC_membrane 92..382 CDD:279056
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216
ABC_membrane 750..1020 CDD:279056 72/294 (24%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 124/239 (52%)
ABCB8NP_001269220.1 MdlB 165..713 CDD:224055 208/577 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 712..735 211/599 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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