DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and LOC100496268

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:XP_004921510.2 Gene:LOC100496268 / 100496268 -ID:- Length:1284 Species:Xenopus tropicalis


Alignment Length:1325 Identity:581/1325 - (43%)
Similarity:810/1325 - (61%) Gaps:64/1325 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TVKNGD----VVKDDVNSRSQYKTNIVLGAKLEDSDRDRKSFEPNKSKKKSKHDESDASDEEDGS 62
            ||.||.    |...|.||.|                :::|.|. ::.|||.|.::...       
 Frog     7 TVVNGSADVTVAISDPNSNS----------------KEKKGFF-SRFKKKEKTEKPPT------- 47

  Fly    63 QYHEDVKQVSYFQLFRYATKKDRALYVIGLLSAVATGLTTPANSLIFGNLANDMIDLGGLLESGK 127
                    |..|.:|||::..||.|.:.|.:::::.|...|...::||::.:..:::|.:.....
 Frog    48 --------VGVFTMFRYSSTSDRILMLFGTIASISHGAALPLMMIVFGDMTDSFVNVGQVGSGNF 104

  Fly   128 SYRADDAISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDM 192
            |..|....|..|.:::..::...:.:|..:|:.:|:.|:.:..:|..||..|||.||.::|.|::
 Frog   105 SLEALINASRNLQEQMTTYAYYYSGLGFGVLLFAYVQISFWTLSAGKQIKRIRSNFFHAVLRQEI 169

  Fly   193 KWYDFNQSGEVASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLT 257
            .|:|.|.:||:.:|:.:|:||:.:|:.:|:.|.:..|..||...::.|||||:|:||.|...|:.
 Frog   170 GWFDVNDAGELNTRLTDDVSKINEGIGDKIAMLLQSLTTFVTGFIIGFVKGWKLTLVILAISPVM 234

  Fly   258 FIAMGLVAVATSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIK 322
            ..:..:.|...|....||:..||.|..|||..||.||||.||.|:.||:..|::.:..||.:.||
 Frog   235 GFSAAIWAKVLSAFTNKELKAYAKAGAVAEEVLSSIRTVFAFGGQDKEIKRYEKNLEEAKRIGIK 299

  Fly   323 RNMFSGIGFGLLWFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMA 387
            :.:.:.:..|..:..|||:||||||||..|:|.|       .|..|:::||||:|::|:..:|..
 Frog   300 KAITANVSIGFAFLMIYAAYALAFWYGTTLIING-------GYTIGSVLTVFFAVIIGAFAVGQT 357

  Fly   388 APYIEAFGIAKGACAKVFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKL 452
            :|.:|||..|:||...:|:||:..|:|:....||.|.::....||||.|:|.||:|.::.:|..|
 Frog   358 SPNVEAFANARGAAYTIFNIIDNQPKIDSFSKEGLKPDKIKGDIEFKNVKFTYPSRTDIQVLKGL 422

  Fly   453 NLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPI 517
            ||.|..|:||||||.|||||||.:||:||||||:.|.:..:|.:::.|:|.:||..||||.||||
 Frog   423 NLNIPSGKTVALVGSSGCGKSTTVQLIQRFYDPEEGVITLDGQDIRSLNIRYLREIIGVVSQEPI 487

  Fly   518 LFATSIYENIRYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIAR 582
            ||.|:|.:||||||||.|.||||.|...|||..||.|||..::|||||||.||||||||||||||
 Frog   488 LFDTTIADNIRYGREDVTMEEIERATKEANAYNFIMKLPDKFETLVGERGTQLSGGQKQRIAIAR 552

  Fly   583 ALIRDPEILLLDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVE 647
            ||:|:|:|||||||||||||.||:.|||||:|...|||||:|||||||:|.||.|...:.|.:||
 Frog   553 ALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTIVVAHRLSTIRNADVIAGFDNGVIVE 617

  Fly   648 SGTHQELMELKDHYFNLVTTQLGEDDGSV-------LS---PTGDIYKNFDIKDEDEEEIKVLSE 702
            .|.|:|||:....||||||.|..|.....       ||   |......|...:......||.::|
 Frog   618 QGGHKELMDKGGVYFNLVTLQTVETSKDTEENLELNLSEKIPLSHTSSNLVRRKSSRHTIKKVTE 682

  Fly   703 -DEDEDVMVTDEKNKKKKKKKVKDPNEVKPMLEVMKMNKPEWLQIAVGCISSVIMGCAMPIFAVL 766
             |..|:|   ||:.|||:    ..|..|. .|:||::||.||....||.|.::|.|...|.||::
 Frog   683 TDNKEEV---DEEGKKKE----DGPPPVS-FLKVMRLNKTEWPYFVVGIICAMINGATQPAFAII 739

  Fly   767 FGSILQILSVKDNDQYVRENSNQYSLYFLIAGIVVGIATFLQIYFFGIAGERLTERLRGLMFEAM 831
            |..|:.:.:...::  :|..|..|||.||..|.:..|..|||.:.||.|||.||:|||...|::|
 Frog   740 FSKIIGVFAGPASE--MRAKSTMYSLLFLALGGISFITFFLQGFTFGKAGEILTKRLRLWSFKSM 802

  Fly   832 LRQEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEWSLGLVA 896
            ||||:.||||..|.||:|..||:.||:.||||||.|:..:.|:|:.|...:.:|..|.|.|.|:.
 Frog   803 LRQEIGWFDDTKNSTGALTTRLATDASQVQGATGSRLALLAQNIANLGTAVIISFIYGWRLTLLI 867

  Fly   897 LAFTPFILIAFYMQRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQNYIGMLIP 961
            ||..|.|..:..:|..:.|.......|.:|...|::.:.|.|||||.||.||..|...|...|..
 Frog   868 LAIVPIIAASALVQLKMFAGHAKKDKKELEKAGKISTDAVLNIRTVVSLTRERKFEAMYEKNLEG 932

  Fly   962 AVEISKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANA 1026
            ....|.:..|..||.|.|::::|:||||.|..:|.:.|....:...|||.|..|::.|..::...
 Frog   933 PYRNSIKKAHLHGLTYALSQAIMYFAYAGCFRFGAYLVAELLMTPDDVFLVFSAIVFGAMALGQT 997

  Fly  1027 LAFAPNMQKGVSAAKTIFTFLRRQPSIVDRPGVSRDPWHSEGYVRFDKVKFSYPTRSEIQVLKGL 1091
            .:|||:..|.:.:|..||:.|.|.|.|.........|.:..|.|:|..|:|:||||.:|.||:||
 Frog   998 SSFAPDYTKAMISAAHIFSLLERVPLIDSYSKEGEKPQNCGGNVQFQGVQFNYPTRPDITVLQGL 1062

  Fly  1092 ELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPI 1156
            :::|.:|:.:||||.|||||||.:.|::||||...|..|:|...||::::..:|.|:||||||||
 Frog  1063 DISVKQGETLALVGSSGCGKSTTVSLLERFYDPFGGEVLVDGHSVRDLNIQWVRAQMGIVSQEPI 1127

  Fly  1157 LFDRTIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAI 1221
            |||.:|.|||:||||:|.||..||.:|.|::|||.||..|...|:||:|:||.|:||||||||||
 Frog  1128 LFDCSIGENIAYGDNSREVTQAEIETAAKEANIHSFIDTLTDKYNTRVGDKGTQMSGGQKQRIAI 1192

  Fly  1222 ARALIRNPKIMLLDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLV 1286
            ||||:|.|||:||||||||||.|||||||:|||.|..|||.|.|||||||:.::|.|.|.:||.|
 Frog  1193 ARALVRKPKILLLDEATSALDTESEKVVQEALDKARTGRTCIVIAHRLSTIQNADKIAVIQNGKV 1257

  Fly  1287 CEAGDHKQLLANRGLYYTLYKLQSG 1311
            .|.|.|:|||..:|:||||..:|.|
 Frog  1258 VEQGTHQQLLQLKGVYYTLVTIQLG 1282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 564/1249 (45%)
ABC_membrane 92..382 CDD:279056 97/289 (34%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 152/236 (64%)
ABC_membrane 750..1020 CDD:279056 104/269 (39%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 144/238 (61%)
LOC100496268XP_004921510.2 PTZ00265 1..1279 CDD:240339 579/1320 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 194 1.000 Domainoid score I3111
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55496
Inparanoid 1 1.050 1029 1.000 Inparanoid score I275
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - otm47420
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

Return to query results.
Submit another query.