DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and XB950724

DIOPT Version :9

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:XP_017950348.2 Gene:XB950724 / 100494740 XenbaseID:XB-GENE-950725 Length:1381 Species:Xenopus tropicalis


Alignment Length:1386 Identity:569/1386 - (41%)
Similarity:794/1386 - (57%) Gaps:139/1386 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DSDRDRKSFEPN-------KSKKKSKHDESDASDEEDGSQYHEDVKQVSYFQLFRYATKKDRALY 88
            ||..|.:.:|..       ||.::::.:.||...:|          .|.:..:.|:|...|..|.
 Frog    24 DSHHDFQYYEKTADNEGAPKSNEEARKNSSDKPSKE----------MVGFLDMVRFADAWDILLM 78

  Fly    89 VIGLLSAVATGLTTPANSLIFGNLANDMIDLGGLLESGKSYRADDAISTLLLD-KVRQFSLQNTY 152
            :.||..|||.|...|...::||::.:..: |.|:..:..|  ...:|..:.|: |:.::|.....
 Frog    79 ITGLFCAVANGTGLPLLIIVFGDMTDSFV-LSGINVTNVS--GCGSIPGIDLEAKMTRYSYYYIG 140

  Fly   153 IGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVASRMNEDLSKMEDG 217
            :|..:.|.|.:.|..|..:|..||:.||..||:::|||||.|:|.||.|.:.:|:.:|::.:.:|
 Frog   141 LGSAVFVLSLIQIWTFLVSATRQIMRIRQIFFKAVLHQDMAWFDSNQVGTLNTRLTDDINTIHEG 205

  Fly   218 LAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVATSRLAKKEVTMYAGA 282
            |.:|:.:||.:|.:||..:|:.||.||:|:||.|:..||...:..:.....:....||:..||.|
 Frog   206 LGDKMCIFVQFLSSFVSGIVVGFVHGWKLTLVILSVSPLLGASAAIWTKLVASFTTKELHAYAKA 270

  Fly   283 AVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWFFIYASYALAFW 347
            ..|||..|:.||||.||.|:.|....|...::.||.:.||:.:.:.:..||..|.|:.:||||||
 Frog   271 GAVAEEILTAIRTVIAFNGQKKAQDKYDANLITAKTVGIKKAVTTNVSMGLSQFLIFGAYALAFW 335

  Fly   348 YGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPYIEAFGIAKGACAKVFHIIEQIP 412
            ||..|.:   .||  |.|..|.::.|||||::|:..:|.|.|.||:...|:||...|::||.:..
 Frog   336 YGTKLTV---DEP--ETYTIGKVLIVFFSVLVGTFALGQATPNIESLANARGAAFAVYNIINKHR 395

  Fly   413 EINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQ 477
            .|:....||.|.|.....||||.:.|.||.||:|.||:.||||:..|:|:||||.|||||||.||
 Frog   396 PIDSSSEEGHKPNRLKGDIEFKNIHFAYPCRPDVQILSGLNLKVEAGKTIALVGMSGCGKSTTIQ 460

  Fly   478 LVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENIRYGREDATREEIEAA 542
            |:||||||..|.:..:|.:::.|::.|||..||||.|||:||.|:|.||||:|||..|..|||.|
 Frog   461 LLQRFYDPSHGEITLDGHDIRTLNVKWLRENIGVVSQEPVLFGTTIAENIRFGRESVTDSEIEQA 525

  Fly   543 AAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATSALDTASEAK 607
            |..|||..||.:||..:.|:||||||||||||||||||||||:|:|:|||||||||||||.|||.
 Frog   526 AKEANAFDFISRLPDKFKTMVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTQSEAI 590

  Fly   608 VQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMELKDHYFNLVTTQ-LGE 671
            |||||:|..||||||::||||||:|.||.|...:.|.|||.|:|.|||..|..|::||..| .||
 Frog   591 VQAALDKARAGRTTIVIAHRLSTIRTADVIAGFHNGVVVEKGSHSELMTKKGVYYSLVMLQKQGE 655

  Fly   672 DDGSVLSPTGDIYKNFDIKDEDEEEIKVLSEDE---DEDVM------------------------ 709
            |.|.              :|.::||...|..:|   :||.:                        
 Frog   656 DSGP--------------EDNEQEEHSFLETEETYLNEDCLSPEADPAHQAVECTDFFRRESFRG 706

  Fly   710 ----VTDEKNKKKKKKKVKDPNEVKPML------EVMKMNKPEWLQIAVGCISSVIMGCAMPIFA 764
                |.::|:..:|.|.:::..|.|.:|      .::::||||||.|.:|.|::.|.|...|.||
 Frog   707 RNDTVNNKKSTLRKSKSLENIKEAKEILPEVSLNRILQLNKPEWLYIVIGIIAAAISGGIYPTFA 771

  Fly   765 VLFGSIL---------------QILSVKDNDQ---------------YVRENSNQY--------- 790
            |:||.::               ..:.:|...|               |...|:..|         
 Frog   772 VIFGKVIGAGVHYSFIHMIHEFLFILIKSGSQQRFYSDVLLTFGLACYFISNAGNYEYVFFFYLI 836

  Fly   791 ----------------------SLYFLIAGIVVGIATFLQIYFFGIAGERLTERLRGLMFEAMLR 833
                                  ||.|.:.|::.........:.||.:||.||.|||.|.|:|:|.
 Frog   837 RCLLQAFQEQDPVKKSQRTALLSLMFFVLGLISFAVHITMGFMFGKSGENLTMRLRSLSFKALLG 901

  Fly   834 QEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEWSLGLVALA 898
            ||:.:|||..|..|.|..||:.||:.::||.|.::|.|..::.||...|.::..:.|.|.|:.||
 Frog   902 QEIGFFDDHRNAVGVLLTRLATDASQIKGAAGSQLGLITMTVCTLLAAILIAFIHGWQLTLLILA 966

  Fly   899 FTPFILIAFYMQRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQNYIGMLIPAV 963
            ..||::....::.|.:|.......|.:|...:::.|.|.|||||.||.:||:|::.|...|....
 Frog   967 CIPFLIGTNIIRMTSVAGHASKDQKALEEAGRISTEAVENIRTVVSLTKEEVFYEKYNASLNGPY 1031

  Fly   964 EISKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANALA 1028
            .::.......|:.|.:|:.:.:|..||...:|.|.:.:..:.|..||.|..|::....|:..:.:
 Frog  1032 RVALGKARMYGVTYAIAQCINYFVNAAVFRFGAWLIANCYMEFESVFVVFSAIVFAAMSVGQSNS 1096

  Fly  1029 FAPNMQKGVSAAKTIFTFLRRQPSIVDRPGVSRDPWHSEGYVRFDKVKFSYPTRSEIQVLKGLEL 1093
            |||:..|..|:|:.:|..|.|:|:|.............||.:.|..|||.||||..:|||:||.:
 Frog  1097 FAPDFGKAKSSAQRMFLLLDRKPAIDSYSNEGETLNEFEGNLEFKNVKFVYPTRPNVQVLQGLNV 1161

  Fly  1094 AVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPILF 1158
            .|.|||.:||||.|||||||.|||::||||..||..|.|..|.:::::..||:|||:||||||||
 Frog  1162 KVLKGQTLALVGSSGCGKSTLIQLLERFYDPMEGNVLADGVDTKSLNIQWLRSQLGLVSQEPILF 1226

  Fly  1159 DRTIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIAR 1223
            |.:|.|||.||||.|.||..|:..|.|.:|||.|:.:||.|||||:|:|||||||||||||||||
 Frog  1227 DCSIGENIRYGDNNRVVTQDEVAEAAKTANIHTFVESLPQGYDTRVGDKGAQLSGGQKQRIAIAR 1291

  Fly  1224 ALIRNPKIMLLDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCE 1288
            ||:|.||::||||||||||.|||||||.|||.|.:|||.|.|||||:||.::|||.|.:||.|.|
 Frog  1292 ALVRKPKVLLLDEATSALDTESEKVVQKALDDARKGRTCIVIAHRLTTVQNADVIAVIQNGEVVE 1356

  Fly  1289 AGDHKQLLANRGLYYTLYKLQ 1309
            .|.|.||||.:|.||.|...|
 Frog  1357 QGTHNQLLAKQGAYYALINSQ 1377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 559/1338 (42%)
ABC_membrane 92..382 CDD:279056 104/290 (36%)
ABC_MTABC3_MDL1_MDL2 431..668 CDD:213216 151/236 (64%)
ABC_membrane 750..1020 CDD:279056 89/330 (27%)
ABC_MTABC3_MDL1_MDL2 1070..1309 CDD:213216 152/238 (64%)
XB950724XP_017950348.2 PTZ00265 77..1371 CDD:240339 552/1315 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 194 1.000 Domainoid score I3111
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1029 1.000 Inparanoid score I275
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D186078at2759
OrthoFinder 1 1.000 - - FOG0000106
OrthoInspector 1 1.000 - - otm47420
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X92
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.