DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and abcb11.2

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:XP_004917764.1 Gene:abcb11.2 / 100489579 XenbaseID:XB-GENE-988819 Length:1349 Species:Xenopus tropicalis


Alignment Length:1358 Identity:550/1358 - (40%)
Similarity:793/1358 - (58%) Gaps:107/1358 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EDSDRDRKSFEPNKS-KKKSKHDESDASDEEDGSQYHEDVKQVSYFQLFRYATKKDRALYVIGLL 93
            ||||..:::.:.|:: ...||.|||        .:..||..:|.:|||||:||..:..:.:.|.|
 Frog    21 EDSDNYKETVDLNQNGNASSKKDES--------KKKPEDSIRVGFFQLFRFATCSETTMMLFGSL 77

  Fly    94 SAVATGLTTPANSLIFGNLANDM----IDLGGLLESGKSY---------------RADDAISTLL 139
            :|:..|...|...|:||.:.:..    |::..|.:..|:.               :.:...|..:
 Frog    78 AAIIHGAAQPCMLLVFGLMIDTFIEYDIEMQELRDPNKTCTNNTITWTNGSLVPDKDNKTFSCGM 142

  Fly   140 LD---KVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSG 201
            ||   ::..|:.....||..:|:..|:.|..:..||..||..||..:||.::..::.|:|....|
 Frog   143 LDIELEMTNFASYYAGIGCSVLILGYMQICFWVTAAARQIQRIRKLYFRKVMRMEIGWFDCTSVG 207

  Fly   202 EVASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAV 266
            |:.:||::|::|:.|.:|::|.:|:.....|:...:|.||.||:|:|:.:...||..:...|:|:
 Frog   208 ELNTRMSDDINKINDAIADQVGIFIQRFTTFLSGFLLGFVNGWKLTLIIIAVSPLIGVGAALMAL 272

  Fly   267 ATSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGF 331
            |.::|..:|:..||.|..||:..|||||||.||.||.|||..|...:|.|:...|::.:..|...
 Frog   273 AVAKLTGRELLAYAKAGAVADEVLSGIRTVAAFGGETKEVDRYDRNLVYAQRWGIRKGIIMGFFT 337

  Fly   332 GLLWFFIYASYALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPYIEAFGI 396
            |.:||.|:..||||||||..||::      .|.|..|.::.||..|::|::|:|.|:|.::||..
 Frog   338 GYMWFIIFLCYALAFWYGSKLVLE------EEEYSPGNLLQVFLGVLVGALNLGQASPCLQAFAS 396

  Fly   397 AKGACAKVFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQT 461
            .:||...:|..|:..|:|:.:..||.||::....|||..:.|.||:||||.||:|:|:.|..|:|
 Frog   397 GRGAATNIFETIDNEPKIDCMSEEGYKLDKVKGEIEFHNISFHYPSRPEVKILDKINMVIKSGET 461

  Fly   462 VALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYEN 526
            .|.|||||.||||.:||:||||||..|.:..:|.:::.|:|.||||.||:|.|||:||||:|.||
 Frog   462 TAFVGPSGAGKSTTVQLIQRFYDPDVGMVTLDGHDIRSLNIQWLRSLIGIVEQEPVLFATTIAEN 526

  Fly   527 IRYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEIL 591
            ||||:|:||.|||..||..|||..||..||:.:||||||.|.|:||||||||||||||:|:|.||
 Frog   527 IRYGKENATMEEIITAAKEANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIARALVRNPRIL 591

  Fly   592 LLDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELME 656
            |||.||||||..|||.||.||:||..|||||.:||||||::.||.||....|..||.|||.||:|
 Frog   592 LLDMATSALDNESEAIVQEALDKVRFGRTTISIAHRLSTIKNADVIVGFEHGRAVEKGTHDELLE 656

  Fly   657 LKDHYFNLVTTQLGEDDGSVLSPTGDIYKNFDIKDEDEEEIK----------------------- 698
            .|..||.|||.|...|..         ..|.:.||:..:|.:                       
 Frog   657 RKGVYFTLVTLQSQGDKA---------LHNMEKKDKSNKEFEEPKLETLQPLKRGSYQASLRASI 712

  Fly   699 ------------------VLSEDEDEDVM----VTDEK-NKKKKKKKVKDPNEVKPMLEVMKMNK 740
                              |:..|..:.:.    ..||. |...|.:::.:..|..|:..::|.|.
 Frog   713 RQRSRSQLSNLVPDTPLLVVGADASDPIQHSTHYDDESDNNMIKTEEIVEDIEPAPVARILKYNA 777

  Fly   741 PEWLQIAVGCISSVIMGCAMPIFAVLFGSILQILSVKDNDQYVRENSNQYSLYFLIAGIVVGIAT 805
            |||..:..|.|.:.|.|...|::|:||..||.|.|:.|.::. |:..|...:.|::.|:|..:..
 Frog   778 PEWPYMLFGSIGAAINGAVSPLYALLFSQILGIFSLPDEEEQ-RDQINGICVLFVLIGVVSFLTQ 841

  Fly   806 FLQIYFFGIAGERLTERLRGLMFEAMLRQEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIGT 870
            |||.|.|..:||.||.|||.|.|.:||.|||.||||..|..|:|..||:.||:.||||||.:||.
 Frog   842 FLQGYTFAKSGELLTRRLRKLGFRSMLGQEVGWFDDPRNSPGALTTRLATDASQVQGATGSQIGM 906

  Fly   871 IVQSISTLALGIALSMYYEWSLGLVALAFTPFILIAFYMQRTLMAKENMGSAKTMENCTKLAVEV 935
            ||.:||.:.:.:.::.|:.|.|.||.:.|.||:.::..:|..::..........||:..:::.|.
 Frog   907 IVNAISNIGVALIIAFYFSWKLTLVIMCFLPFLAVSGALQAKMLTGFANQDKHAMESAGRISSEA 971

  Fly   936 VSNIRTVASLGREEMFHQNYIGMLIPAVEISKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVI 1000
            :.||||:|.:.:|:.|...|...|......:.:..:..||.:|.|:.::|.|......||.:.|.
 Frog   972 LGNIRTIAGIAKEKTFVDMYEEQLEAPYRSAIKKANVYGLCFGFAQCIVFIANTVSYRYGGYLVD 1036

  Fly  1001 HRGILFGDVFKVSQALIMGTASIANALAFAPNMQKGVSAAKTIFTFLRRQPSIVDRPGVSRDPWH 1065
            ..|:.:..||:|..:::....::..|.::.|:..|...:|...|..:.|.|.|    .|..|  |
 Frog  1037 KEGLHYSFVFRVISSIVTSGTALGRASSYTPDYAKAKISAARFFKLVDRIPKI----SVYTD--H 1095

  Fly  1066 SE------GYVRFDKVKFSYPTRSEIQVLKGLELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDV 1124
            .|      |.:.|...||:||||.:||||.||:::|..||.:|.||.|||||||.:||::||||.
 Frog  1096 GERWPDFKGSIDFQDCKFTYPTRPDIQVLNGLDVSVKPGQTLAFVGSSGCGKSTSVQLLERFYDP 1160

  Fly  1125 DEGATLIDECDVRNVSMTNLRNQLGIVSQEPILFDRTIRENISYGDNARNVTDQEIISACKKSNI 1189
            |:|..|||..:.:||::..||:::|||||||:|||.:|.|||.||||.:.::..:||.|.||:.:
 Frog  1161 DKGKVLIDGHNSKNVNVAFLRSKIGIVSQEPVLFDCSIIENIRYGDNNQELSKDKIIEASKKAQL 1225

  Fly  1190 HEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARALIRNPKIMLLDEATSALDAESEKVVQDALD 1254
            |:|:..||..|||.:|..|:|||.|||||||||||::|:|||:||||||||||.||||.||.|||
 Frog  1226 HDFVMGLPDKYDTNVGAHGSQLSRGQKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQAALD 1290

  Fly  1255 AASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEAGDHKQLLANRGLYYTLYKLQSGA 1312
            .|.||||.|.|||||||:.:||:|.|...|:|.|.|:|::|:..:|.||.|  :.:||
 Frog  1291 RAREGRTCIVIAHRLSTIQNSDIIAVMSRGIVIEKGNHEELMEKKGAYYKL--VTTGA 1346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 536/1312 (41%)
abcb11.2XP_004917764.1 PTZ00265 159..1340 CDD:240339 511/1202 (43%)
MdlB 767..1344 CDD:440747 250/585 (43%)

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