DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and abcb8

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_001121515.1 Gene:abcb8 / 100158634 XenbaseID:XB-GENE-1010256 Length:688 Species:Xenopus tropicalis


Alignment Length:591 Identity:214/591 - (36%)
Similarity:323/591 - (54%) Gaps:38/591 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VIGLLSAVATGLTTPANSLIFG-NLANDMID--LGGLLESGKSYRADDAISTLLLDKVRQFSLQN 150
            :|.||:||.         |.|| .|.|..|.  ||.|:.....|..:.|.:.|...:.....|..
 Frog   117 LIALLTAVL---------LAFGAALLNIRIPLMLGELVNVVSRYTREHAGNYLQEVQGPALKLLC 172

  Fly   151 TYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVASRMNEDLSKME 215
            .|....:|.|.|  |...:........::|...|.|:|.||:.::|..::|.:.:|:..|:.:.:
 Frog   173 LYGAQGLLTCGY--IVLLSRVGERVAGSMRKSLFFSLLRQDVAFFDAEKTGLLVNRLTSDVQEFK 235

  Fly   216 DGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVATSRLAKKEVTMYA 280
            ....:.:...:..|...||..:..:....:|:.:.|..:|:...:..|:.....:|:::.....|
 Frog   236 SSFKQVISQGLRSLTQTVGCFLSLYYISPKLTGLLLVVMPVLVGSGALIGSFLRKLSRRAQEQVA 300

  Fly   281 GAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAA----KILNIKRNMFSGIGFGLLWFFIYAS 341
            .|..:|:.||..:||||||..|::|:..|...|..:    ::|.:...:|.|:...:|...:   
 Frog   301 RATGLADEALGNVRTVKAFAMESREMELYSAEVDKSSGQNEVLGVGIAVFQGLSNVVLNCIV--- 362

  Fly   342 YALAFWYGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPYIEAFG-IAKGACA--K 403
                    :|.:..|....:.:...||.:::  |.|...::...||...: .|| :.:|..|  :
 Frog   363 --------LGTIFAGGSLMSSKELSAGELMS--FLVASQTVQRSMANMSV-LFGQVVRGLSAGGR 416

  Fly   404 VFHIIEQIPEINPIDGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPS 468
            ||..:...|.| |:.| |.||......|.||:|.|.|||||...:|...:|:|..|:||||||.|
 Frog   417 VFEFMSLEPTI-PLSG-GFKLPVLRGEIHFKDVSFSYPTRPGHEVLRSFDLRIPHGKTVALVGQS 479

  Fly   469 GCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSR-IGVVGQEPILFATSIYENIRYGRE 532
            |.||||...|::|||||..|.:..:|.:::.||.:|||.. ||.:.|||:||.|:|.||||:||.
 Frog   480 GGGKSTVAALLERFYDPTEGAVQLDGVDIRILDPSWLRGEVIGFINQEPVLFGTTIIENIRFGRP 544

  Fly   533 DATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEAT 597
            |||..|:..||..|||..||:..|:||:|::||||..||||||||:||||||::||:||:|||||
 Frog   545 DATDAEVHEAAIQANADSFIRSFPEGYNTMLGERGVTLSGGQKQRVAIARALLKDPKILILDEAT 609

  Fly   598 SALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMELKDHYF 662
            |||||.||..||.||::..:|||.:::||||||:..||.|||::||:|.|.||||:|:.....|.
 Frog   610 SALDTESERAVQVALDRARSGRTVLVIAHRLSTISEADFIVVLSKGQVAEFGTHQDLLRRGGLYA 674

  Fly   663 NLVTTQ 668
            :|:..|
 Frog   675 DLIRRQ 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 214/591 (36%)
abcb8NP_001121515.1 MdlB 106..684 CDD:440747 214/591 (36%)

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