DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-1 and smyd3

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_073783521.1 Gene:smyd3 / 569507 ZFINID:ZDB-GENE-051120-138 Length:483 Species:Danio rerio


Alignment Length:522 Identity:110/522 - (21%)
Similarity:172/522 - (32%) Gaps:178/522 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CHVC--EEPTKNKCSNCNQVSYCSVQHQKQDWKVHKPSCHPFKIAHNEQLGRHL---VATRTIKP 63
            |..|  ...:.::||.|....|||||.|||.|..||..|...|         ||   :.|.::: 
Zfish    50 CQSCLKRGESLSRCSQCKTARYCSVQCQKQAWPDHKRECKCLK---------HLQPRIPTDSVR- 104

  Fly    64 YEIVLKEAPLVRGPAQISAPVCLGCLNGIEAEDHIECEQCGWPLCGPECKSLDEHK---AECGLT 125
                            :.|.:....|:..|::..             |..|:.||:   |:....
Zfish   105 ----------------LVARIIFKLLSQSESDQE-------------ELYSIAEHQSHLADMSEE 140

  Fly   126 KDRGQK---VNVQEF------------GGPHPLYTCLSTVRCLLIGETSTEKASKFQDLESLEST 175
            |..|.|   ..:|.:            .|..|: :.|:.|.|.....:..|    .||       
Zfish   141 KKEGLKHLCTTLQVYLAEENCDLSRLPSGLDPV-SLLARVTCNCFSISDGE----LQD------- 193

  Fly   176 RRGSNQWKADLVSIGQFIPKFFKTQKFTEE----EIMKAVGALQINGHEVPTT---------DPS 227
                       |.:|.:....|.|....:.    .:....|.|.:....:.|:         :.|
Zfish   194 -----------VGVGLYPRNMFSTIMLQDRAECVSLSPGRGWLCLTAQILHTSTGINRKLLENKS 247

  Fly   228 HVAV-FYTASFTENSCLPNLAKSFNKNGHCILWAPREIKKNAHLSICYSDAMWGTADRQRHLMQT 291
            :..| .:..|...:.|.||....| :.....|.|.|.|:....|:|.|:|.:..:.||:..|.:.
Zfish   248 YAGVTMHGMSLLNHDCQPNCIMMF-EGKRLTLRAVRVIRSAEELTISYTDILAPSKDRRSQLQEQ 311

  Fly   292 KLFKCACERCVDVTELDTNYSAIKCEDRQCGGLMLPTKADEWNGSWRCRECHKQVQKHYVERILE 356
            ..|:|.|:||             ..||:.|                                   
Zfish   312 YHFRCECKRC-------------STEDKDC----------------------------------- 328

  Fly   357 RAGKDIQSMEKIAENGLK-YLKHYEKWLPPQHFHMSEIKILLVQLLAKDQKELM----VIPDDR- 415
                ::.|.||.|...:| .:.|.|:....||:.         :||.:.|..|.    |:||.. 
Zfish   329 ----EMLSGEKSAWTSIKDSIHHLEQLQSEQHWD---------ELLKESQALLHRHSDVVPDRNI 380

  Fly   416 -LLLKLNFAREL---VELYEKLTPCEVRTLG--TLCF-ELHSAIAEQTRRVA-LETSLSPKDRLE 472
             :|..|:.|.:.   ::.||.......|.||  .|.| :.|.:.|.:..||. |:..|.   |||
Zfish   381 YMLRLLDLAMDACISLDDYETALEYGNRALGPYKLYFSDPHPSRAVELLRVGKLQHFLG---RLE 442

  Fly   473 ES 474
            |:
Zfish   443 EA 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312 16/37 (43%)
SET_SMYD <217..301 CDD:380997 22/93 (24%)
smyd3XP_073783521.1 None

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