DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-1 and LOC4578080

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_061515696.1 Gene:LOC4578080 / 4578080 VectorBaseID:AGAMI1_012181 Length:378 Species:Anopheles gambiae


Alignment Length:110 Identity:35/110 - (31%)
Similarity:55/110 - (50%) Gaps:14/110 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VQHQKQDWKVHKPSCHPFKIAHNEQLGRHLVATRTIKPYEIVLKEAPLVRGPAQISAPV-CLGCL 89
            :.|...:...|..:|  .::..|||.||::|.||.:|..::|:.:.|.|:...:....| |..| 
Mosquito   206 LSHPGHEHMPHVANC--LQLQQNEQYGRYVVTTRRLKVGDVVMLDTPFVKTLQENCRYVRCDFC- 267

  Fly    90 NGIEAE---DHIECEQCGWPL-CGPEC--KSLDE-HKAECGLTKD 127
               .||   ..|.||.|.|.: |..||  |:.|: |:.|||:.:|
Mosquito   268 ---HAERPFTLIPCEGCTWVMYCSQECLSKAFDQYHRYECGVMRD 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312 2/13 (15%)
SET_SMYD <217..301 CDD:380997
LOC4578080XP_061515696.1 None
Blue background indicates that the domain is not in the aligned region.

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