DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-1 and LOC3291442

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_061508966.1 Gene:LOC3291442 / 3291442 VectorBaseID:AGAMI1_005176 Length:453 Species:Anopheles gambiae


Alignment Length:70 Identity:20/70 - (28%)
Similarity:31/70 - (44%) Gaps:12/70 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CHVCEEPTKNKCSNCNQVSYCSVQHQKQDW-KVHKPSCHPFKIAHNEQLGRHLVATRTIKP---Y 64
            |....|.....|:.|..|.|||.:.|:|.: :.|:..|   :|..:.||     ..|..||   :
Mosquito   217 CGATNEHNLRPCTGCTGVMYCSEECQEQSYQRYHQFEC---EIVDDLQL-----LFRGPKPTRMF 273

  Fly    65 EIVLK 69
            .:||:
Mosquito   274 HVVLR 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312 11/36 (31%)
SET_SMYD <217..301 CDD:380997
LOC3291442XP_061508966.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.