DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-1 and LOC3291277

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_564258.2 Gene:LOC3291277 / 3291277 VectorBaseID:AGAMI1_001411 Length:1309 Species:Anopheles gambiae


Alignment Length:624 Identity:137/624 - (21%)
Similarity:200/624 - (32%) Gaps:204/624 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNPCHVCEEPTKNKCSNCNQVSYCSVQHQKQDWKVHKPSCHPFKIAH-----------------N 48
            ||..:..|:..|....|..|:....|.|....:...:..|...::::                 |
Mosquito   150 MNKLNKREQDVKRCIENDAQIIPRRVTHTPGKYWARETGCPVLQLSYEAHANIPHLAKCVELRQN 214

  Fly    49 EQLGRHLVATRTIKPYEIVLKEAPLVRGPAQISAPV-----CLGCLNGIEAEDH---IECEQCGW 105
            .|.|||||.|:.:|..::.|.|.|.    |.:....     |..|.|    ||.   |.||.|..
Mosquito   215 SQYGRHLVTTQHLKAGDVFLIEKPY----ANLLCDTERYKRCAFCQN----EDTFTLIPCEGCTV 271

  Fly   106 PL-CGPECKSLDE-----HKAECGLTKDRGQKVNVQEFGGPHPLYTCLSTVRCLLIGETSTEKAS 164
            .: |..||  :|:     |:.|||:.:|..:.|. ..|||...|.|            .:|..||
Mosquito   272 AMYCSKEC--MDKAHKQYHRYECGVLRDCWRIVG-HLFGGMVGLRT------------VATAIAS 321

  Fly   165 KFQDLE------------------------------------SLESTRRGSNQWKADL------- 186
            ..||||                                    :....|||    :.||       
Mosquito   322 FDQDLEGWIDHLNTLDEANVNAFTVDWNEVTDSDMYDTVHVLATNQKRRG----RKDLSKLIFFT 382

  Fly   187 ----------VSIGQFIPKFFKTQKFTEEEIMKAVGALQIN------------------------ 217
                      ..:|..........|...:.:::.|....||                        
Mosquito   383 SIVHLLLLERTELGPLCESNPARSKLLFDLLLRHVQTSLINKKGVYHMTRSKDDEEDDEYEDNYF 447

  Fly   218 GH------EVPTTD---PSH-VAVFYTASFTENSCLPNLAKSFNKNGHCILWAPREIKKNAHLSI 272
            |:      |...||   .:| :||:...|...:||:||:|.....:|.|...|.|.|.....|..
Mosquito   448 GYDRDDEEEQEYTDYGEETHAIAVYPLFSMVNHSCIPNVAPIHLLDGRCAFVANRPIAAGEQLFD 512

  Fly   273 CYSDAMWGTAD---RQRHLMQTKLFKCACERCVDVTELDTNYSAIKCEDRQCGGLMLPTKADE-W 333
            .| |.:....|   |:..|.|:..|.|.|..|.....:.....::..|.    .|:|..:.|. .
Mosquito   513 VY-DFLTMEFDPSFRRYCLKQSYFFNCRCPACQSGWPMPFRNKSLAEEH----FLLLLREMDNVV 572

  Fly   334 NGSWRCRECHKQVQKHY-------VERILERAGKDIQS----------MEKIAENGLKYL----- 376
            .|..|..|...|..:||       .|.||....:.|.|          ||.|||.||:.:     
Mosquito   573 QGLPRLVEYMNQAGRHYPKHQITAAEVILSHTLRMIHSYSPVDDMLNEMEGIAEIGLEAIFKRIL 637

  Fly   377 ---KHYEKWLPPQHFHMSEIKILLVQLLAKDQKELMVIPDDRLLLKLNFARELVELYEKLTPCEV 438
               ..|...||..       .||.:|..::|....:::.|.      ||  :||:.:.:      
Mosquito   638 IRNFRYRITLPLG-------SILFLQPKSQDVNMSLMLGDS------NF--DLVQYFLR------ 681

  Fly   439 RTLGTLCFELHSAIAEQTRRVALETSL--SPKDRLEESL 475
              |..:.||...:.|.|.|....|..:  ..:|.|..||
Mosquito   682 --LWDMLFEHRISEATQARPEMAEAIIRREIEDYLRTSL 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312 6/35 (17%)
SET_SMYD <217..301 CDD:380997 29/120 (24%)
LOC3291277XP_564258.2 None

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