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Protein Alignment SmydA-1 and Smyd4

DIOPT Version :9

Sequence 1:	NP_610944.1	Gene:	SmydA-1 / 36581	FlyBaseID:	FBgn0033917	Length:	513	Species:	Drosophila melanogaster
Sequence 2:	NP_001096081.1	Gene:	Smyd4 / 319822	MGIID:	2442796	Length:	799	Species:	Mus musculus

Alignment Length:	545	Identity:	120/545 - (22%)
Similarity:	172/545 - (31%)	Gaps:	190/545 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly    41 HPFKIAHNEQLGRHLVATRTIKPYEIVLKEAPLVRG--PAQISAP-----------------VCL 86
            ||.|       |||||||:.|.|.|:::||...|..  |.::..|                 .|.
Mouse   240 HPLK-------GRHLVATKDILPGELLVKEDAFVSVLIPGEMPRPHHCLENKWDTRVTSGDLYCH 297

  Fly    87 GCLNGIEAEDHIECEQCGW-PLCGPEC--KSLD-EHKAECGL----------------------- 124
            .||....|.  :.|..|.: ..|..||  ::.| .|..||.|
Mouse   298 RCLKHTLAT--VPCGSCSYAKYCSQECMQQAWDLYHSTECSLGGLLLTLGVFCHVALRMTLLARF 360

  Fly   125 -TKDRGQKVNVQEFGGPHPLYTCLSTVRCLL-----IGETSTEKASKFQD--------------- 168
             ..||..::...|.|...   |||...:.|:     ..:..:|:.||..:
Mouse   361 EDVDRVVRMLCDEVGSTD---TCLPESKNLVKAFDYTSQGESEEKSKIGEPPIPGCNVNGKYGSN 422

  Fly   169 ----LESLESTRRGS---------------NQWKADLVSIGQFIPKFFKTQKFTEEEIMKAV--- 211
                ...|..|.:.|               .|.|||.|.     .:..|:.|      :|||
Mouse   423 YNAIFSLLPHTEKHSPEHRFICAISVSALCRQLKADSVQ-----AQTLKSPK------LKAVTPG 476

  Fly   212 --------GA--------LQINGHEVPTTDPSH-----------------VAVFYTASFTENSCL 243
                    ||        ||.|...:  |...|                 ..:|...|...:||.
Mouse   477 LCADLTVWGAAMLRHMLQLQCNAQAI--TSICHTGSNESIITNSRQIRLATGIFPVVSLLNHSCR 539

  Fly   244 PNLAKSFNKNGHCILWAPREIKKNAHLSICYS--DAMWGTADRQRHLMQTKLFKCACERCVDVT- 305
            ||.:.||......:..|.| |.|...:..||.  ::..|.|:||:.|.....|.|.|..|...|
Mouse   540 PNTSVSFTGTVATVRAAQR-IAKGQEILHCYGPHESRMGVAERQQRLSSQYFFDCRCGACHAETL 603

  Fly   306 --ELDTNYSAIKCEDRQCGGLMLPTKADEWNGSWRC--RECHKQVQK-HYVERI----------- 354
              .....:.|..|  :.|..||      :.|....|  ..|...|.: ..|.|:
Mouse   604 RAAAAPRWEAFCC--KTCRALM------QGNDVLSCSNESCTNSVSRDQLVSRLQDLQQQVCMAQ 660

  Fly   355 -LERAGKDIQSMEKIAENGLKYLKHYEKWLPPQHFHMSEIKILLVQL----------LAKDQKEL 408
             |.|.||..|:::::    |:..:..|.:|..:|..:.||:..|.|.          .|..||.|
Mouse   661 KLLRTGKPEQAIQQL----LRCREAAESFLSAEHTVLGEIEDGLAQAHATLGNWLKSAAHVQKSL 721

  Fly   409 MVIPDDRLLLKLNFARELVELYEKL 433
            .|:........:....||.:|.:.|
Mouse   722 QVVETRHGPSSVEIGHELFKLAQVL 746

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.