DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-1 and set6

DIOPT Version :9

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_596514.1 Gene:set6 / 2541370 PomBaseID:SPBP8B7.07c Length:483 Species:Schizosaccharomyces pombe


Alignment Length:441 Identity:91/441 - (20%)
Similarity:151/441 - (34%) Gaps:149/441 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CHVC-EEPTK-NKCSNCNQVSYCSVQHQKQDWKVHKPSCHPFKIAHNEQLGRHLVATRTIKPYEI 66
            |..| ||..| .:|:.|..:.|||...||.||..||                             
pombe    49 CSTCTEEKVKTQRCAACKIIHYCSKGCQKADWPFHK----------------------------- 84

  Fly    67 VLKEAPLVRGPAQISAPVCLGCLNGIEAEDHIECEQCGWPLCGPECKSLDEHKAECGLTKDRGQK 131
                                                       .|||:|.       .:|..|..
pombe    85 -------------------------------------------LECKALQ-------ASKQNGIL 99

  Fly   132 VNVQEFGGPHPLYTCLSTVRCLLIGETSTEKASKFQDLESLESTRRG-SNQWK-ADLV-SIGQFI 193
            .:|           |...:|..|:.:   :..:..:.:|..::..:. |:.|. |:|: |.....
pombe   100 PSV-----------CRLLIRLYLLWQ---KNPAIIEPMEGHQNEFQAVSSSWSDAELIASAASHY 150

  Fly   194 PKFFKTQKFTEEEIMKAVGALQINGHEVPTTDPSHVAVFYTASF-------------TENSCLPN 245
            .:.::.:.|.:.....||.|:.:                .|:||             ..:||.||
pombe   151 TQIYQAELFQKLFCRLAVNAMNL----------------VTSSFDSLGMCLDTILCRLNHSCDPN 199

  Fly   246 LAKSFNKNGHCI-LWAPREIKKNAHLSICYSDAMWGTADRQRHLMQTKLFKCACERCV-DVTELD 308
            ....|  :|..: |.:.|:|||:..|.|.|.|.....:.||:.|::...|.|.|.||. |.|..:
pombe   200 CQIIF--DGAIVQLVSKRDIKKDEQLFISYIDIRLPKSIRQKQLLKKYFFSCYCPRCENDHTTKE 262

  Fly   309 TNYSAIKCEDRQCGGLM--LPTKADEWNGSWRCRECHKQVQKHYVERILERAGKDIQSMEKIAEN 371
            |:.|......|....||  |....|.|:..|:..........|:::         :..:::...|
pombe   263 TDGSKWMGRLRNSKSLMKNLAMARDLWSCGWKQTAFPWSNLLHHIK---------LGMLDESNFN 318

  Fly   372 G---LKYLK-HYEKWLPPQHFHMSEIKILLV-QLLAKDQKELMVIPDDRLL 417
            |   ..||| ..:::|...|. :.|.::||: :.:|.:.|.|| .|:|:.|
pombe   319 GAFAALYLKSSADEFLDALHV-VDEYQLLLLGKQVAMEVKHLM-FPNDKPL 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:280009 16/37 (43%)
set6NP_596514.1 SET 5..483 CDD:225491 91/441 (21%)
zf-MYND 49..87 CDD:280009 16/109 (15%)
SET <142..227 CDD:279228 22/102 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I1875
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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