DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-1 and Smyd5

DIOPT Version :10

Sequence 1:NP_610944.1 Gene:SmydA-1 / 36581 FlyBaseID:FBgn0033917 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_659167.2 Gene:Smyd5 / 232187 MGIID:108048 Length:416 Species:Mus musculus


Alignment Length:383 Identity:81/383 - (21%)
Similarity:126/383 - (32%) Gaps:135/383 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GRHLVATRTIKPYEIVLKEAPLVRGP----AQISAPVCLGCLNGIE-AED--------------- 96
            |:.|.||:.|:..|.:..|.|||...    |......|..||..:| ||:               
Mouse    33 GKGLFATQLIRKGETIFIERPLVAAQFLWNALYQYRACDHCLRALEKAEENAQRLTGKPSQILPH 97

  Fly    97 ----------HIECEQCGWPLCGPECK---SLDEHKAEC-GLTKDRGQKVN-VQE-FGGPH-PLY 144
                      |..|..|....|..||:   :...|:..| |.:.|....:| :|| :...| |..
Mouse    98 PELCSVRKDLHQNCPHCQVMYCSAECRLAAAEQYHQILCPGPSHDPRHPLNKLQEAWRSVHYPPE 162

  Fly   145 TC--------LSTVR---------------C------------------------LLIG---ETS 159
            |.        ::||:               |                        ||:|   |..
Mouse   163 TASIMLMARMVATVKQAKDKDHWVRLFNHFCSRTANQEQAIVHKLLKGKFKDQLELLLGLFKEAL 227

  Fly   160 TEKA-------SKFQDLESLESTR------RGSNQW----------KADLVSIGQFIPKFFKTQK 201
            .|:|       ..|:.|.:|..|.      ...:||          ..|...:..||.:.:|..:
Mouse   228 YEEALSLWFTPEGFRSLFALVGTNGQGIGTSSLSQWVHACDALELTPQDREQLDTFIDQLYKDIE 292

  Fly   202 FTEEEIMKAVGALQINGHEVPTTDPSHVAVFYTASFTENSCLPNLAKSFNKNGHCI-LWAPREIK 265
            ....|.:...|:                .:|...|...:||:||...||.:|...: :.|..:||
Mouse   293 AATGEFLNCEGS----------------GLFVLQSCCNHSCVPNAETSFPENNFVLHVTALEDIK 341

  Fly   266 KNAHLSICYSDAMWGTADRQRH-----LMQTKLFKCACERCVDVTELDTNYSAIKCED 318
            ....:.|.|.|..  ..:|.||     |.:..||.|:|.:|:...: |.|.::.:.|:
Mouse   342 PGEEICISYLDCC--QRERSRHSRHKILRENYLFNCSCPKCLAEAD-DPNVTSEEEEE 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-1NP_610944.1 zf-MYND 4..40 CDD:460312
SET_SMYD <217..301 CDD:380997 23/89 (26%)
Smyd5NP_659167.2 SET_SMYD5 22..383 CDD:380919 78/367 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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